Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH17O14917 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 BICD1-207ENST00000551848 1962 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH17O14917 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 AL133373.2-201ENST00000623187 2828 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 AL109659.2-201ENST00000606809 1674 ntBASIC17.59■□□□□ 0.41
PCDH17O14917 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH17O14917 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH17O14917 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH17O14917 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH17O14917 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.59■□□□□ 0.41
PCDH17O14917 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH17O14917 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH17O14917 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH17O14917 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDH17O14917 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDH17O14917 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDH17O14917 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH17O14917 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH17O14917 STARP1-201ENST00000397973 869 ntBASIC17.58■□□□□ 0.4
PCDH17O14917 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.58■□□□□ 0.4
PCDH17O14917 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PCDH17O14917 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH17O14917 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH17O14917 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 GPAT2P1-201ENST00000444924 1672 ntBASIC17.58■□□□□ 0.4
PCDH17O14917 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH17O14917 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH17O14917 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDH17O14917 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH17O14917 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH17O14917 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms