Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.69■□□□□ 0.42
CDX4O14627 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
CDX4O14627 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 AC211486.1-202ENST00000416371 468 ntBASIC17.69■□□□□ 0.42
CDX4O14627 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 AP006288.1-201ENST00000446065 395 ntBASIC17.69■□□□□ 0.42
CDX4O14627 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 AC211476.1-201ENST00000503899 468 ntBASIC17.69■□□□□ 0.42
CDX4O14627 MTDHP4-201ENST00000600287 670 ntBASIC17.69■□□□□ 0.42
CDX4O14627 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.69■□□□□ 0.42
CDX4O14627 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.69■□□□□ 0.42
CDX4O14627 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDX4O14627 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDX4O14627 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CDX4O14627 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.69■□□□□ 0.42
CDX4O14627 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.68■□□□□ 0.42
CDX4O14627 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.68■□□□□ 0.42
CDX4O14627 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.68■□□□□ 0.42
CDX4O14627 NKAPP1-205ENST00000585790 367 ntBASIC17.68■□□□□ 0.42
CDX4O14627 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.68■□□□□ 0.42
CDX4O14627 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDX4O14627 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.68■□□□□ 0.42
CDX4O14627 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CDX4O14627 HEIH-201ENST00000623091 1652 ntBASIC17.67■□□□□ 0.42
CDX4O14627 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDX4O14627 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CDX4O14627 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 MIR149-201ENST00000384879 89 ntBASIC17.67■□□□□ 0.42
CDX4O14627 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.67■□□□□ 0.42
CDX4O14627 AC009947.1-201ENST00000444350 727 ntBASIC17.67■□□□□ 0.42
CDX4O14627 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.67■□□□□ 0.42
CDX4O14627 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDX4O14627 AC009154.2-201ENST00000621177 724 ntBASIC17.67■□□□□ 0.42
CDX4O14627 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDX4O14627 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.67■□□□□ 0.42
CDX4O14627 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDX4O14627 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.66■□□□□ 0.42
CDX4O14627 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.66■□□□□ 0.42
CDX4O14627 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.66■□□□□ 0.42
CDX4O14627 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.66■□□□□ 0.42
CDX4O14627 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.66■□□□□ 0.42
CDX4O14627 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.66■□□□□ 0.42
CDX4O14627 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
CDX4O14627 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.66■□□□□ 0.42
CDX4O14627 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.66■□□□□ 0.42
CDX4O14627 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.66■□□□□ 0.42
CDX4O14627 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDX4O14627 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDX4O14627 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDX4O14627 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
CDX4O14627 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms