Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR661-201ENST00000384842 89 ntBASIC19.52■□□□□ 0.72
SOX1O00570 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 PMS2P4-201ENST00000412466 1052 ntBASIC19.52■□□□□ 0.72
SOX1O00570 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.52■□□□□ 0.72
SOX1O00570 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.52■□□□□ 0.72
SOX1O00570 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.52■□□□□ 0.72
SOX1O00570 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX1O00570 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SOX1O00570 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX1O00570 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SOX1O00570 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SOX1O00570 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.52■□□□□ 0.71
SOX1O00570 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SOX1O00570 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SOX1O00570 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX1O00570 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SOX1O00570 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX1O00570 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX1O00570 BX005266.1-201ENST00000473402 457 ntBASIC19.51■□□□□ 0.71
SOX1O00570 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.51■□□□□ 0.71
SOX1O00570 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.51■□□□□ 0.71
SOX1O00570 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.51■□□□□ 0.71
SOX1O00570 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
SOX1O00570 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.51■□□□□ 0.71
SOX1O00570 PGM5P2-202ENST00000637225 1043 ntBASIC19.51■□□□□ 0.71
SOX1O00570 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX1O00570 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX1O00570 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SOX1O00570 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX1O00570 AC125634.1-201ENST00000438758 1403 ntBASIC19.51■□□□□ 0.71
SOX1O00570 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.5■□□□□ 0.71
SOX1O00570 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
SOX1O00570 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 CRYGEP-201ENST00000412192 528 ntBASIC19.5■□□□□ 0.71
SOX1O00570 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.5■□□□□ 0.71
SOX1O00570 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 AC002472.2-201ENST00000442739 958 ntBASIC19.5■□□□□ 0.71
SOX1O00570 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.5■□□□□ 0.71
SOX1O00570 AC093214.1-201ENST00000511688 1107 ntBASIC19.5■□□□□ 0.71
SOX1O00570 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX1O00570 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SOX1O00570 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.5■□□□□ 0.71
SOX1O00570 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 LINC01521-201ENST00000504184 1943 ntBASIC19.5■□□□□ 0.71
SOX1O00570 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SOX1O00570 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX1O00570 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX1O00570 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SOX1O00570 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SOX1O00570 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.49■□□□□ 0.71
SOX1O00570 TERF1P3-201ENST00000505638 1227 ntBASIC19.49■□□□□ 0.71
SOX1O00570 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.49■□□□□ 0.71
SOX1O00570 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.49■□□□□ 0.71
SOX1O00570 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.49■□□□□ 0.71
SOX1O00570 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX1O00570 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SOX1O00570 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SOX1O00570 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SOX1O00570 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.49■□□□□ 0.71
SOX1O00570 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX1O00570 AL691432.2-201ENST00000607222 2038 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms