Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 KRT18P57-201ENST00000443599 1254 ntBASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC139887.4-201ENST00000607877 719 ntBASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC196A0A1B0GTZ2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 GMCL1P1-201ENST00000463439 1581 ntBASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 YBX1P2-201ENST00000489612 999 ntBASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC011558.1-201ENST00000623459 338 ntBASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC196A0A1B0GTZ2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC117947.1-201ENST00000427448 529 ntBASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AL441883.1-201ENST00000566170 1045 ntBASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC196A0A1B0GTZ2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC196A0A1B0GTZ2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC026471.1-201ENST00000564629 3026 ntBASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC196A0A1B0GTZ2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms