Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 AL359075.1-203ENST00000462729 1002 ntBASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC092597.1-201ENST00000487352 616 ntBASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-4A0A0C4DH59 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 KRT89P-201ENST00000620027 1478 ntBASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV5-4A0A0C4DH59 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC092647.4-201ENST00000457211 535 ntBASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC008687.5-201ENST00000593746 558 ntBASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-4A0A0C4DH59 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-4A0A0C4DH59 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms