Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-7A0A0A0MS04 KRT16P1-201ENST00000399124 1418 ntBASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC011298.2-201ENST00000617989 482 ntBASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC073648.6-201ENST00000641589 218 ntBASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 AL031985.4-201ENST00000642138 673 ntBASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-7A0A0A0MS04 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC093677.2-201ENST00000600169 1863 ntBASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 KRT18P41-201ENST00000518924 1277 ntBASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC130371.2-201ENST00000619443 611 ntBASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC008556.1-201ENST00000610908 2040 ntBASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-7A0A0A0MS04 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 AL109659.2-201ENST00000606809 1674 ntBASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 MYLKP1-201ENST00000509077 1580 ntBASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-7A0A0A0MS04 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms