Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PCDHGC4Q9Y5F7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGC4Q9Y5F7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PCDHGC4Q9Y5F7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
PCDHGC4Q9Y5F7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGC4Q9Y5F7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGC4Q9Y5F7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGC4Q9Y5F7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGC4Q9Y5F7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHGC4Q9Y5F7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
PCDHGC4Q9Y5F7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC4Q9Y5F7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC4Q9Y5F7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC4Q9Y5F7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PCDHGC4Q9Y5F7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGC4Q9Y5F7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGC4Q9Y5F7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHGC4Q9Y5F7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGC4Q9Y5F7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.22■■□□□ 1.63
PCDHGC4Q9Y5F7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC4Q9Y5F7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHGC4Q9Y5F7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDHGC4Q9Y5F7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGC4Q9Y5F7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHGC4Q9Y5F7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PCDHGC4Q9Y5F7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHGC4Q9Y5F7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC4Q9Y5F7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC4Q9Y5F7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGC4Q9Y5F7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PCDHGC4Q9Y5F7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC4Q9Y5F7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHGC4Q9Y5F7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHGC4Q9Y5F7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGC4Q9Y5F7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC4Q9Y5F7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PCDHGC4Q9Y5F7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC4Q9Y5F7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGC4Q9Y5F7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHGC4Q9Y5F7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHGC4Q9Y5F7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGC4Q9Y5F7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHGC4Q9Y5F7 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.14■■□□□ 1.62
PCDHGC4Q9Y5F7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDHGC4Q9Y5F7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC4Q9Y5F7 AL359258.2-201ENST00000564063 1566 ntBASIC25.13■■□□□ 1.61
PCDHGC4Q9Y5F7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHGC4Q9Y5F7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGC4Q9Y5F7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PCDHGC4Q9Y5F7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC4Q9Y5F7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGC4Q9Y5F7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHGC4Q9Y5F7 WHAMMP3-201ENST00000611636 1609 ntBASIC25.12■■□□□ 1.61
PCDHGC4Q9Y5F7 AC022413.1-201ENST00000624602 984 ntBASIC25.11■■□□□ 1.61
PCDHGC4Q9Y5F7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PCDHGC4Q9Y5F7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGC4Q9Y5F7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 AC060814.1-201ENST00000554326 538 ntBASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.09■■□□□ 1.61
PCDHGC4Q9Y5F7 GPX1-201ENST00000419349 1106 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms