Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.05■■□□□ 1.6
MRM3Q9HC36 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
MRM3Q9HC36 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
MRM3Q9HC36 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.03■■□□□ 1.6
MRM3Q9HC36 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
MRM3Q9HC36 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.02■■□□□ 1.6
MRM3Q9HC36 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MRM3Q9HC36 DUX4L11-201ENST00000611504 1267 ntBASIC25.02■■□□□ 1.6
MRM3Q9HC36 DUX4L12-201ENST00000614593 1267 ntBASIC25.02■■□□□ 1.6
MRM3Q9HC36 DUX4L14-201ENST00000621227 1267 ntBASIC25.02■■□□□ 1.6
MRM3Q9HC36 AL449106.1-201ENST00000608517 1980 ntBASIC25.02■■□□□ 1.6
MRM3Q9HC36 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MRM3Q9HC36 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MRM3Q9HC36 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MRM3Q9HC36 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
MRM3Q9HC36 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MRM3Q9HC36 MIR7108-201ENST00000614319 87 ntBASIC25■■□□□ 1.59
MRM3Q9HC36 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MRM3Q9HC36 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MRM3Q9HC36 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25■■□□□ 1.59
MRM3Q9HC36 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MRM3Q9HC36 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
MRM3Q9HC36 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
MRM3Q9HC36 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
MRM3Q9HC36 WHAMMP3-201ENST00000611636 1609 ntBASIC24.98■■□□□ 1.59
MRM3Q9HC36 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
MRM3Q9HC36 ZNRF2P2-203ENST00000454624 420 ntBASIC24.98■■□□□ 1.59
MRM3Q9HC36 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.98■■□□□ 1.59
MRM3Q9HC36 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MRM3Q9HC36 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.97■■□□□ 1.59
MRM3Q9HC36 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MRM3Q9HC36 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.97■■□□□ 1.59
MRM3Q9HC36 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
MRM3Q9HC36 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
MRM3Q9HC36 AC008813.1-201ENST00000536597 885 ntBASIC24.96■■□□□ 1.59
MRM3Q9HC36 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MRM3Q9HC36 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.95■■□□□ 1.58
MRM3Q9HC36 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
MRM3Q9HC36 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MRM3Q9HC36 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MRM3Q9HC36 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
MRM3Q9HC36 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
MRM3Q9HC36 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.94■■□□□ 1.58
MRM3Q9HC36 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MRM3Q9HC36 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
MRM3Q9HC36 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.93■■□□□ 1.58
MRM3Q9HC36 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
MRM3Q9HC36 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
MRM3Q9HC36 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.92■■□□□ 1.58
MRM3Q9HC36 AP004609.3-201ENST00000610705 1884 ntBASIC24.92■■□□□ 1.58
MRM3Q9HC36 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
MRM3Q9HC36 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
MRM3Q9HC36 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.91■■□□□ 1.58
MRM3Q9HC36 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.91■■□□□ 1.58
MRM3Q9HC36 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.91■■□□□ 1.58
MRM3Q9HC36 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
MRM3Q9HC36 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
MRM3Q9HC36 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MRM3Q9HC36 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
MRM3Q9HC36 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.9■■□□□ 1.58
MRM3Q9HC36 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MRM3Q9HC36 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.9■■□□□ 1.58
MRM3Q9HC36 AC148477.6-201ENST00000623746 465 ntBASIC24.9■■□□□ 1.58
MRM3Q9HC36 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
MRM3Q9HC36 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.9■■□□□ 1.58
MRM3Q9HC36 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
MRM3Q9HC36 AC142472.1-201ENST00000612013 1741 ntBASIC24.89■■□□□ 1.58
MRM3Q9HC36 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.89■■□□□ 1.58
MRM3Q9HC36 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
MRM3Q9HC36 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
MRM3Q9HC36 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
MRM3Q9HC36 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MRM3Q9HC36 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MRM3Q9HC36 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.88■■□□□ 1.57
MRM3Q9HC36 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MRM3Q9HC36 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
MRM3Q9HC36 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
MRM3Q9HC36 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
MRM3Q9HC36 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
MRM3Q9HC36 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.87■■□□□ 1.57
MRM3Q9HC36 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
MRM3Q9HC36 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
MRM3Q9HC36 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MRM3Q9HC36 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
MRM3Q9HC36 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MRM3Q9HC36 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.86■■□□□ 1.57
MRM3Q9HC36 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.86■■□□□ 1.57
MRM3Q9HC36 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MRM3Q9HC36 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
MRM3Q9HC36 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MRM3Q9HC36 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
MRM3Q9HC36 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.85■■□□□ 1.57
MRM3Q9HC36 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
MRM3Q9HC36 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
MRM3Q9HC36 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
MRM3Q9HC36 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.85■■□□□ 1.57
MRM3Q9HC36 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.84■■□□□ 1.57
MRM3Q9HC36 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
MRM3Q9HC36 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.84■■□□□ 1.57
MRM3Q9HC36 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms