Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.91■■□□□ 1.42
BRF2Q9HAW0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.91■■□□□ 1.42
BRF2Q9HAW0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.9■■□□□ 1.42
BRF2Q9HAW0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
BRF2Q9HAW0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BRF2Q9HAW0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BRF2Q9HAW0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
BRF2Q9HAW0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
BRF2Q9HAW0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
BRF2Q9HAW0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
BRF2Q9HAW0 DUX4L11-201ENST00000611504 1267 ntBASIC23.89■■□□□ 1.41
BRF2Q9HAW0 DUX4L12-201ENST00000614593 1267 ntBASIC23.89■■□□□ 1.41
BRF2Q9HAW0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.89■■□□□ 1.41
BRF2Q9HAW0 DUX4L14-201ENST00000621227 1267 ntBASIC23.89■■□□□ 1.41
BRF2Q9HAW0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.89■■□□□ 1.41
BRF2Q9HAW0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.88■■□□□ 1.41
BRF2Q9HAW0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
BRF2Q9HAW0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BRF2Q9HAW0 AL449106.1-201ENST00000608517 1980 ntBASIC23.87■■□□□ 1.41
BRF2Q9HAW0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BRF2Q9HAW0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BRF2Q9HAW0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
BRF2Q9HAW0 ZNRF2P2-203ENST00000454624 420 ntBASIC23.86■■□□□ 1.41
BRF2Q9HAW0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.86■■□□□ 1.41
BRF2Q9HAW0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.86■■□□□ 1.41
BRF2Q9HAW0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BRF2Q9HAW0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BRF2Q9HAW0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
BRF2Q9HAW0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRF2Q9HAW0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
BRF2Q9HAW0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
BRF2Q9HAW0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRF2Q9HAW0 AC008813.1-201ENST00000536597 885 ntBASIC23.84■■□□□ 1.41
BRF2Q9HAW0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BRF2Q9HAW0 WHAMMP3-201ENST00000611636 1609 ntBASIC23.84■■□□□ 1.41
BRF2Q9HAW0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
BRF2Q9HAW0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.83■■□□□ 1.41
BRF2Q9HAW0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BRF2Q9HAW0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRF2Q9HAW0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
BRF2Q9HAW0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
BRF2Q9HAW0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.82■■□□□ 1.4
BRF2Q9HAW0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRF2Q9HAW0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRF2Q9HAW0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRF2Q9HAW0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRF2Q9HAW0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.8■■□□□ 1.4
BRF2Q9HAW0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.8■■□□□ 1.4
BRF2Q9HAW0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
BRF2Q9HAW0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF2Q9HAW0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRF2Q9HAW0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.79■■□□□ 1.4
BRF2Q9HAW0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
BRF2Q9HAW0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.78■■□□□ 1.4
BRF2Q9HAW0 AP004609.3-201ENST00000610705 1884 ntBASIC23.77■■□□□ 1.4
BRF2Q9HAW0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRF2Q9HAW0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.77■■□□□ 1.4
BRF2Q9HAW0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
BRF2Q9HAW0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRF2Q9HAW0 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.76■■□□□ 1.39
BRF2Q9HAW0 ABHD17AP4-201ENST00000411545 909 ntBASIC23.76■■□□□ 1.39
BRF2Q9HAW0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.76■■□□□ 1.39
BRF2Q9HAW0 AC148477.6-201ENST00000623746 465 ntBASIC23.76■■□□□ 1.39
BRF2Q9HAW0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRF2Q9HAW0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.75■■□□□ 1.39
BRF2Q9HAW0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 AC142472.1-201ENST00000612013 1741 ntBASIC23.74■■□□□ 1.39
BRF2Q9HAW0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.74■■□□□ 1.39
BRF2Q9HAW0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
BRF2Q9HAW0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.73■■□□□ 1.39
BRF2Q9HAW0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRF2Q9HAW0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BRF2Q9HAW0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
BRF2Q9HAW0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms