Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
ATXN3LQ9H3M9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ATXN3LQ9H3M9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATXN3LQ9H3M9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ATXN3LQ9H3M9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ATXN3LQ9H3M9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATXN3LQ9H3M9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATXN3LQ9H3M9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ATXN3LQ9H3M9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATXN3LQ9H3M9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ATXN3LQ9H3M9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATXN3LQ9H3M9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.28■■□□□ 1.8
ATXN3LQ9H3M9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATXN3LQ9H3M9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.27■■□□□ 1.8
ATXN3LQ9H3M9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATXN3LQ9H3M9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 AL157400.5-201ENST00000507624 621 ntBASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATXN3LQ9H3M9 AC018358.1-201ENST00000631079 1402 ntBASIC26.25■■□□□ 1.79
ATXN3LQ9H3M9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.25■■□□□ 1.79
ATXN3LQ9H3M9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 AL033527.3-201ENST00000566366 1196 ntBASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 AL359258.2-201ENST00000564063 1566 ntBASIC26.24■■□□□ 1.79
ATXN3LQ9H3M9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATXN3LQ9H3M9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATXN3LQ9H3M9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATXN3LQ9H3M9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
ATXN3LQ9H3M9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.22■■□□□ 1.79
ATXN3LQ9H3M9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATXN3LQ9H3M9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ATXN3LQ9H3M9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATXN3LQ9H3M9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATXN3LQ9H3M9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ATXN3LQ9H3M9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATXN3LQ9H3M9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATXN3LQ9H3M9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATXN3LQ9H3M9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.19■■□□□ 1.78
ATXN3LQ9H3M9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATXN3LQ9H3M9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ATXN3LQ9H3M9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 KRT18P60-201ENST00000312876 1297 ntBASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.18■■□□□ 1.78
ATXN3LQ9H3M9 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.17■■□□□ 1.78
ATXN3LQ9H3M9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATXN3LQ9H3M9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.17■■□□□ 1.78
ATXN3LQ9H3M9 AP002414.2-202ENST00000590929 1450 ntBASIC26.17■■□□□ 1.78
ATXN3LQ9H3M9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
ATXN3LQ9H3M9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATXN3LQ9H3M9 AC007029.1-201ENST00000604183 313 ntBASIC26.15■■□□□ 1.78
ATXN3LQ9H3M9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ATXN3LQ9H3M9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATXN3LQ9H3M9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
ATXN3LQ9H3M9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.14■■□□□ 1.78
ATXN3LQ9H3M9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.14■■□□□ 1.78
ATXN3LQ9H3M9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.14■■□□□ 1.78
ATXN3LQ9H3M9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
ATXN3LQ9H3M9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 SMPD5-203ENST00000639008 1464 ntBASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 AC004987.1-201ENST00000428627 508 ntBASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.13■■□□□ 1.77
ATXN3LQ9H3M9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATXN3LQ9H3M9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 TSPY13P-201ENST00000338964 914 ntBASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 ATP5G2P3-201ENST00000429083 425 ntBASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATXN3LQ9H3M9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.1■■□□□ 1.77
ATXN3LQ9H3M9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ATXN3LQ9H3M9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
ATXN3LQ9H3M9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATXN3LQ9H3M9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ATXN3LQ9H3M9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATXN3LQ9H3M9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.09■■□□□ 1.77
ATXN3LQ9H3M9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms