Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 AC022413.1-201ENST00000624602 984 ntBASIC26.72■■□□□ 1.87
SNX25Q9H3E2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNX25Q9H3E2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SNX25Q9H3E2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNX25Q9H3E2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SNX25Q9H3E2 HSD17B1P1-201ENST00000590052 955 ntBASIC26.71■■□□□ 1.87
SNX25Q9H3E2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.71■■□□□ 1.87
SNX25Q9H3E2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SNX25Q9H3E2 GPX1-201ENST00000419349 1106 ntBASIC26.7■■□□□ 1.86
SNX25Q9H3E2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SNX25Q9H3E2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNX25Q9H3E2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.69■■□□□ 1.86
SNX25Q9H3E2 AC126177.7-201ENST00000547904 679 ntBASIC26.69■■□□□ 1.86
SNX25Q9H3E2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX25Q9H3E2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNX25Q9H3E2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNX25Q9H3E2 AC142086.6-201ENST00000621154 1765 ntBASIC26.68■■□□□ 1.86
SNX25Q9H3E2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNX25Q9H3E2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNX25Q9H3E2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNX25Q9H3E2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNX25Q9H3E2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.67■■□□□ 1.86
SNX25Q9H3E2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.67■■□□□ 1.86
SNX25Q9H3E2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.66■■□□□ 1.86
SNX25Q9H3E2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.66■■□□□ 1.86
SNX25Q9H3E2 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.66■■□□□ 1.86
SNX25Q9H3E2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNX25Q9H3E2 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.66■■□□□ 1.86
SNX25Q9H3E2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SNX25Q9H3E2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.65■■□□□ 1.86
SNX25Q9H3E2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNX25Q9H3E2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SNX25Q9H3E2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.64■■□□□ 1.86
SNX25Q9H3E2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.64■■□□□ 1.86
SNX25Q9H3E2 AC060814.1-201ENST00000554326 538 ntBASIC26.64■■□□□ 1.86
SNX25Q9H3E2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNX25Q9H3E2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNX25Q9H3E2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNX25Q9H3E2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.62■■□□□ 1.85
SNX25Q9H3E2 LINC01003-201ENST00000564834 1764 ntBASIC26.62■■□□□ 1.85
SNX25Q9H3E2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.62■■□□□ 1.85
SNX25Q9H3E2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNX25Q9H3E2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SNX25Q9H3E2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.62■■□□□ 1.85
SNX25Q9H3E2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.61■■□□□ 1.85
SNX25Q9H3E2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNX25Q9H3E2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNX25Q9H3E2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.61■■□□□ 1.85
SNX25Q9H3E2 AL359258.2-201ENST00000564063 1566 ntBASIC26.61■■□□□ 1.85
SNX25Q9H3E2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNX25Q9H3E2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SNX25Q9H3E2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNX25Q9H3E2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.59■■□□□ 1.85
SNX25Q9H3E2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.59■■□□□ 1.85
SNX25Q9H3E2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNX25Q9H3E2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.58■■□□□ 1.85
SNX25Q9H3E2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.57■■□□□ 1.84
SNX25Q9H3E2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX25Q9H3E2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX25Q9H3E2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX25Q9H3E2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX25Q9H3E2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX25Q9H3E2 BX255925.1-201ENST00000566954 1854 ntBASIC26.56■■□□□ 1.84
SNX25Q9H3E2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
SNX25Q9H3E2 RNF126P1-201ENST00000567452 1320 ntBASIC26.55■■□□□ 1.84
SNX25Q9H3E2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.55■■□□□ 1.84
SNX25Q9H3E2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNX25Q9H3E2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNX25Q9H3E2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.54■■□□□ 1.84
SNX25Q9H3E2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNX25Q9H3E2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNX25Q9H3E2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNX25Q9H3E2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNX25Q9H3E2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNX25Q9H3E2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNX25Q9H3E2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.52■■□□□ 1.84
SNX25Q9H3E2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
SNX25Q9H3E2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNX25Q9H3E2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.51■■□□□ 1.83
SNX25Q9H3E2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNX25Q9H3E2 AC092296.2-201ENST00000589470 999 ntBASIC26.5■■□□□ 1.83
SNX25Q9H3E2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX25Q9H3E2 RARRES2P2-201ENST00000394842 485 ntBASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms