Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.32■■□□□ 1.96
CDT1Q9H211 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.31■■□□□ 1.96
CDT1Q9H211 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.31■■□□□ 1.96
CDT1Q9H211 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.31■■□□□ 1.96
CDT1Q9H211 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDT1Q9H211 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDT1Q9H211 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.3■■□□□ 1.96
CDT1Q9H211 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.3■■□□□ 1.96
CDT1Q9H211 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDT1Q9H211 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CDT1Q9H211 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CDT1Q9H211 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDT1Q9H211 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDT1Q9H211 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.28■■□□□ 1.96
CDT1Q9H211 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.27■■□□□ 1.96
CDT1Q9H211 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDT1Q9H211 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDT1Q9H211 RNF126P1-201ENST00000567452 1320 ntBASIC27.26■■□□□ 1.95
CDT1Q9H211 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDT1Q9H211 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDT1Q9H211 RARRES2P2-201ENST00000394842 485 ntBASIC27.25■■□□□ 1.95
CDT1Q9H211 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDT1Q9H211 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CDT1Q9H211 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CDT1Q9H211 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CDT1Q9H211 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.24■■□□□ 1.95
CDT1Q9H211 AC126177.7-201ENST00000547904 679 ntBASIC27.24■■□□□ 1.95
CDT1Q9H211 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDT1Q9H211 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDT1Q9H211 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDT1Q9H211 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CDT1Q9H211 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CDT1Q9H211 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CDT1Q9H211 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDT1Q9H211 AC092296.2-201ENST00000589470 999 ntBASIC27.21■■□□□ 1.95
CDT1Q9H211 AL359258.2-201ENST00000564063 1566 ntBASIC27.21■■□□□ 1.95
CDT1Q9H211 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.19■■□□□ 1.94
CDT1Q9H211 AL157400.5-201ENST00000507624 621 ntBASIC27.19■■□□□ 1.94
CDT1Q9H211 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CDT1Q9H211 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDT1Q9H211 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CDT1Q9H211 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.16■■□□□ 1.94
CDT1Q9H211 LINC01003-201ENST00000564834 1764 ntBASIC27.16■■□□□ 1.94
CDT1Q9H211 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.16■■□□□ 1.94
CDT1Q9H211 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.15■■□□□ 1.94
CDT1Q9H211 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDT1Q9H211 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDT1Q9H211 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDT1Q9H211 AC142086.6-201ENST00000621154 1765 ntBASIC27.13■■□□□ 1.93
CDT1Q9H211 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CDT1Q9H211 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CDT1Q9H211 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDT1Q9H211 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.12■■□□□ 1.93
CDT1Q9H211 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.12■■□□□ 1.93
CDT1Q9H211 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDT1Q9H211 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDT1Q9H211 ECEL1P2-201ENST00000461596 1295 ntBASIC27.1■■□□□ 1.93
CDT1Q9H211 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.1■■□□□ 1.93
CDT1Q9H211 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.09■■□□□ 1.93
CDT1Q9H211 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CDT1Q9H211 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.09■■□□□ 1.93
CDT1Q9H211 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDT1Q9H211 WHAMMP3-201ENST00000611636 1609 ntBASIC27.08■■□□□ 1.93
CDT1Q9H211 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CDT1Q9H211 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.08■■□□□ 1.93
CDT1Q9H211 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.08■■□□□ 1.93
CDT1Q9H211 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CDT1Q9H211 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.07■■□□□ 1.92
CDT1Q9H211 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDT1Q9H211 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.06■■□□□ 1.92
CDT1Q9H211 BX255925.1-201ENST00000566954 1854 ntBASIC27.06■■□□□ 1.92
CDT1Q9H211 ABHD17AP5-201ENST00000580133 923 ntBASIC27.06■■□□□ 1.92
CDT1Q9H211 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CDT1Q9H211 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms