Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.32■■□□□ 1.96
CDT1Q9H211 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.31■■□□□ 1.96
CDT1Q9H211 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.31■■□□□ 1.96
CDT1Q9H211 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.31■■□□□ 1.96
CDT1Q9H211 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDT1Q9H211 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDT1Q9H211 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.3■■□□□ 1.96
CDT1Q9H211 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.3■■□□□ 1.96
CDT1Q9H211 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDT1Q9H211 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CDT1Q9H211 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CDT1Q9H211 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDT1Q9H211 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDT1Q9H211 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDT1Q9H211 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.28■■□□□ 1.96
CDT1Q9H211 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.27■■□□□ 1.96
CDT1Q9H211 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDT1Q9H211 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDT1Q9H211 RNF126P1-201ENST00000567452 1320 ntBASIC27.26■■□□□ 1.95
CDT1Q9H211 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CDT1Q9H211 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDT1Q9H211 RARRES2P2-201ENST00000394842 485 ntBASIC27.25■■□□□ 1.95
CDT1Q9H211 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDT1Q9H211 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CDT1Q9H211 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CDT1Q9H211 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CDT1Q9H211 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.24■■□□□ 1.95
CDT1Q9H211 AC126177.7-201ENST00000547904 679 ntBASIC27.24■■□□□ 1.95
CDT1Q9H211 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CDT1Q9H211 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDT1Q9H211 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CDT1Q9H211 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDT1Q9H211 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CDT1Q9H211 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CDT1Q9H211 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CDT1Q9H211 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDT1Q9H211 AC092296.2-201ENST00000589470 999 ntBASIC27.21■■□□□ 1.95
CDT1Q9H211 AL359258.2-201ENST00000564063 1566 ntBASIC27.21■■□□□ 1.95
CDT1Q9H211 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.19■■□□□ 1.94
CDT1Q9H211 AL157400.5-201ENST00000507624 621 ntBASIC27.19■■□□□ 1.94
CDT1Q9H211 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDT1Q9H211 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CDT1Q9H211 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDT1Q9H211 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDT1Q9H211 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CDT1Q9H211 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.16■■□□□ 1.94
CDT1Q9H211 LINC01003-201ENST00000564834 1764 ntBASIC27.16■■□□□ 1.94
CDT1Q9H211 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.16■■□□□ 1.94
CDT1Q9H211 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.15■■□□□ 1.94
CDT1Q9H211 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDT1Q9H211 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDT1Q9H211 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDT1Q9H211 AC142086.6-201ENST00000621154 1765 ntBASIC27.13■■□□□ 1.93
CDT1Q9H211 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CDT1Q9H211 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CDT1Q9H211 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDT1Q9H211 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDT1Q9H211 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.12■■□□□ 1.93
CDT1Q9H211 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.12■■□□□ 1.93
CDT1Q9H211 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDT1Q9H211 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.11■■□□□ 1.93
CDT1Q9H211 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDT1Q9H211 ECEL1P2-201ENST00000461596 1295 ntBASIC27.1■■□□□ 1.93
CDT1Q9H211 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.1■■□□□ 1.93
CDT1Q9H211 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.09■■□□□ 1.93
CDT1Q9H211 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CDT1Q9H211 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.09■■□□□ 1.93
CDT1Q9H211 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDT1Q9H211 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDT1Q9H211 WHAMMP3-201ENST00000611636 1609 ntBASIC27.08■■□□□ 1.93
CDT1Q9H211 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CDT1Q9H211 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.08■■□□□ 1.93
CDT1Q9H211 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.08■■□□□ 1.93
CDT1Q9H211 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CDT1Q9H211 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.07■■□□□ 1.92
CDT1Q9H211 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDT1Q9H211 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.06■■□□□ 1.92
CDT1Q9H211 BX255925.1-201ENST00000566954 1854 ntBASIC27.06■■□□□ 1.92
CDT1Q9H211 ABHD17AP5-201ENST00000580133 923 ntBASIC27.06■■□□□ 1.92
CDT1Q9H211 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CDT1Q9H211 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDT1Q9H211 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms