Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.16■■□□□ 1.94
NPAS4Q8IUM7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 DUX4L18-201ENST00000553347 1267 ntBASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 AC026202.3-201ENST00000600805 1127 ntBASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
NPAS4Q8IUM7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.14■■□□□ 1.94
NPAS4Q8IUM7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
NPAS4Q8IUM7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
NPAS4Q8IUM7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
NPAS4Q8IUM7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.14■■□□□ 1.93
NPAS4Q8IUM7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.13■■□□□ 1.93
NPAS4Q8IUM7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NPAS4Q8IUM7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
NPAS4Q8IUM7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NPAS4Q8IUM7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NPAS4Q8IUM7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.11■■□□□ 1.93
NPAS4Q8IUM7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NPAS4Q8IUM7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
NPAS4Q8IUM7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NPAS4Q8IUM7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.1■■□□□ 1.93
NPAS4Q8IUM7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NPAS4Q8IUM7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 RP9P-202ENST00000450133 1212 ntBASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NPAS4Q8IUM7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.08■■□□□ 1.93
NPAS4Q8IUM7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
NPAS4Q8IUM7 AL139393.2-201ENST00000608721 2025 ntBASIC27.07■■□□□ 1.92
NPAS4Q8IUM7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
NPAS4Q8IUM7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
NPAS4Q8IUM7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
NPAS4Q8IUM7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
NPAS4Q8IUM7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NPAS4Q8IUM7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.05■■□□□ 1.92
NPAS4Q8IUM7 AC093536.1-201ENST00000569153 554 ntBASIC27.05■■□□□ 1.92
NPAS4Q8IUM7 ABCB10P3-201ENST00000561950 2166 ntBASIC27.04■■□□□ 1.92
NPAS4Q8IUM7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.04■■□□□ 1.92
NPAS4Q8IUM7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.04■■□□□ 1.92
NPAS4Q8IUM7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NPAS4Q8IUM7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
NPAS4Q8IUM7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NPAS4Q8IUM7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NPAS4Q8IUM7 RAP2CP1-202ENST00000605179 643 ntBASIC27.03■■□□□ 1.92
NPAS4Q8IUM7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 AP002414.2-202ENST00000590929 1450 ntBASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 DUX4L9-201ENST00000449051 1259 ntBASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.02■■□□□ 1.92
NPAS4Q8IUM7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
NPAS4Q8IUM7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.01■■□□□ 1.91
NPAS4Q8IUM7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NPAS4Q8IUM7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27■■□□□ 1.91
NPAS4Q8IUM7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27■■□□□ 1.91
NPAS4Q8IUM7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
NPAS4Q8IUM7 MIR3960-201ENST00000583311 91 ntBASIC26.99■■□□□ 1.91
NPAS4Q8IUM7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.99■■□□□ 1.91
NPAS4Q8IUM7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
NPAS4Q8IUM7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
NPAS4Q8IUM7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.97■■□□□ 1.91
NPAS4Q8IUM7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.97■■□□□ 1.91
NPAS4Q8IUM7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
NPAS4Q8IUM7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NPAS4Q8IUM7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
NPAS4Q8IUM7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NPAS4Q8IUM7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.96■■□□□ 1.91
NPAS4Q8IUM7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.96■■□□□ 1.91
NPAS4Q8IUM7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.96■■□□□ 1.91
NPAS4Q8IUM7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
NPAS4Q8IUM7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
NPAS4Q8IUM7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NPAS4Q8IUM7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.95■■□□□ 1.9
NPAS4Q8IUM7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.95■■□□□ 1.9
NPAS4Q8IUM7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.95■■□□□ 1.9
NPAS4Q8IUM7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.95■■□□□ 1.9
NPAS4Q8IUM7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
NPAS4Q8IUM7 SPCS2P3-201ENST00000500401 656 ntBASIC26.94■■□□□ 1.9
NPAS4Q8IUM7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.94■■□□□ 1.9
NPAS4Q8IUM7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms