Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 DUX4L29-201ENST00000425409 679 ntBASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 AC110285.7-201ENST00000624417 1536 ntBASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 AC021231.2-201ENST00000594613 730 ntBASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL55Q7Z7F7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL55Q7Z7F7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.79■□□□□ 0.12
MRPL55Q7Z7F7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPL55Q7Z7F7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
MRPL55Q7Z7F7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRPL55Q7Z7F7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms