Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NIPA1Q7RTP0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
NIPA1Q7RTP0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
NIPA1Q7RTP0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.3■■■□□ 2.12
NIPA1Q7RTP0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.29■■■□□ 2.12
NIPA1Q7RTP0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NIPA1Q7RTP0 AC092296.2-201ENST00000589470 999 ntBASIC28.29■■■□□ 2.12
NIPA1Q7RTP0 RARRES2P2-201ENST00000394842 485 ntBASIC28.28■■■□□ 2.12
NIPA1Q7RTP0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.28■■■□□ 2.12
NIPA1Q7RTP0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NIPA1Q7RTP0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
NIPA1Q7RTP0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NIPA1Q7RTP0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.26■■■□□ 2.11
NIPA1Q7RTP0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NIPA1Q7RTP0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NIPA1Q7RTP0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
NIPA1Q7RTP0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NIPA1Q7RTP0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
NIPA1Q7RTP0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
NIPA1Q7RTP0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
NIPA1Q7RTP0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
NIPA1Q7RTP0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NIPA1Q7RTP0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NIPA1Q7RTP0 AL359258.2-201ENST00000564063 1566 ntBASIC28.22■■■□□ 2.11
NIPA1Q7RTP0 AL157400.5-201ENST00000507624 621 ntBASIC28.2■■■□□ 2.1
NIPA1Q7RTP0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NIPA1Q7RTP0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NIPA1Q7RTP0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NIPA1Q7RTP0 ECEL1P2-201ENST00000461596 1295 ntBASIC28.19■■■□□ 2.1
NIPA1Q7RTP0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
NIPA1Q7RTP0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
NIPA1Q7RTP0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
NIPA1Q7RTP0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
NIPA1Q7RTP0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
NIPA1Q7RTP0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NIPA1Q7RTP0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NIPA1Q7RTP0 LINC01003-201ENST00000564834 1764 ntBASIC28.16■■■□□ 2.1
NIPA1Q7RTP0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
NIPA1Q7RTP0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
NIPA1Q7RTP0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.16■■■□□ 2.1
NIPA1Q7RTP0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.15■■■□□ 2.1
NIPA1Q7RTP0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NIPA1Q7RTP0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
NIPA1Q7RTP0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
NIPA1Q7RTP0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
NIPA1Q7RTP0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NIPA1Q7RTP0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NIPA1Q7RTP0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NIPA1Q7RTP0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NIPA1Q7RTP0 AC142086.6-201ENST00000621154 1765 ntBASIC28.13■■■□□ 2.09
NIPA1Q7RTP0 WHAMMP3-201ENST00000611636 1609 ntBASIC28.12■■■□□ 2.09
NIPA1Q7RTP0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NIPA1Q7RTP0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.12■■■□□ 2.09
NIPA1Q7RTP0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.12■■■□□ 2.09
NIPA1Q7RTP0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NIPA1Q7RTP0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
NIPA1Q7RTP0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NIPA1Q7RTP0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.11■■■□□ 2.09
NIPA1Q7RTP0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 ABHD17AP5-201ENST00000580133 923 ntBASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.1■■■□□ 2.09
NIPA1Q7RTP0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NIPA1Q7RTP0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NIPA1Q7RTP0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.09■■■□□ 2.09
NIPA1Q7RTP0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NIPA1Q7RTP0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
NIPA1Q7RTP0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NIPA1Q7RTP0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
NIPA1Q7RTP0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NIPA1Q7RTP0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NIPA1Q7RTP0 BX255925.1-201ENST00000566954 1854 ntBASIC28.07■■■□□ 2.08
NIPA1Q7RTP0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NIPA1Q7RTP0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.07■■■□□ 2.08
NIPA1Q7RTP0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NIPA1Q7RTP0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.06■■■□□ 2.08
NIPA1Q7RTP0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
NIPA1Q7RTP0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.05■■■□□ 2.08
NIPA1Q7RTP0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NIPA1Q7RTP0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
NIPA1Q7RTP0 AC025884.2-201ENST00000553429 711 ntBASIC28.04■■■□□ 2.08
NIPA1Q7RTP0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.04■■■□□ 2.08
NIPA1Q7RTP0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NIPA1Q7RTP0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.04■■■□□ 2.08
NIPA1Q7RTP0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
NIPA1Q7RTP0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms