Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.13■■■□□ 2.73
CCDC30Q5VVM6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
CCDC30Q5VVM6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CCDC30Q5VVM6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.12■■■□□ 2.73
CCDC30Q5VVM6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
CCDC30Q5VVM6 AC126177.7-201ENST00000547904 679 ntBASIC32.11■■■□□ 2.73
CCDC30Q5VVM6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CCDC30Q5VVM6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CCDC30Q5VVM6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CCDC30Q5VVM6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCDC30Q5VVM6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
CCDC30Q5VVM6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
CCDC30Q5VVM6 RNF126P1-201ENST00000567452 1320 ntBASIC32.08■■■□□ 2.73
CCDC30Q5VVM6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCDC30Q5VVM6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CCDC30Q5VVM6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CCDC30Q5VVM6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CCDC30Q5VVM6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.06■■■□□ 2.72
CCDC30Q5VVM6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.06■■■□□ 2.72
CCDC30Q5VVM6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CCDC30Q5VVM6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CCDC30Q5VVM6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.05■■■□□ 2.72
CCDC30Q5VVM6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCDC30Q5VVM6 RARRES2P2-201ENST00000394842 485 ntBASIC32.03■■■□□ 2.72
CCDC30Q5VVM6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CCDC30Q5VVM6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC30Q5VVM6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
CCDC30Q5VVM6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC30Q5VVM6 AL359258.2-201ENST00000564063 1566 ntBASIC32.02■■■□□ 2.72
CCDC30Q5VVM6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC30Q5VVM6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.01■■■□□ 2.72
CCDC30Q5VVM6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 AC092296.2-201ENST00000589470 999 ntBASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC30Q5VVM6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
CCDC30Q5VVM6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CCDC30Q5VVM6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
CCDC30Q5VVM6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CCDC30Q5VVM6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC30Q5VVM6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC30Q5VVM6 LINC01003-201ENST00000564834 1764 ntBASIC31.96■■■□□ 2.71
CCDC30Q5VVM6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
CCDC30Q5VVM6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC30Q5VVM6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC30Q5VVM6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC30Q5VVM6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC30Q5VVM6 AL157400.5-201ENST00000507624 621 ntBASIC31.94■■■□□ 2.7
CCDC30Q5VVM6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC30Q5VVM6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC30Q5VVM6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC30Q5VVM6 AC142086.6-201ENST00000621154 1765 ntBASIC31.93■■■□□ 2.7
CCDC30Q5VVM6 ECEL1P2-201ENST00000461596 1295 ntBASIC31.92■■■□□ 2.7
CCDC30Q5VVM6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.92■■■□□ 2.7
CCDC30Q5VVM6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC30Q5VVM6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CCDC30Q5VVM6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
CCDC30Q5VVM6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC30Q5VVM6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC30Q5VVM6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC30Q5VVM6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC30Q5VVM6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC30Q5VVM6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.89■■■□□ 2.7
CCDC30Q5VVM6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 WHAMMP3-201ENST00000611636 1609 ntBASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC30Q5VVM6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC30Q5VVM6 BX255925.1-201ENST00000566954 1854 ntBASIC31.85■■■□□ 2.69
CCDC30Q5VVM6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC30Q5VVM6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.85■■■□□ 2.69
CCDC30Q5VVM6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC30Q5VVM6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
CCDC30Q5VVM6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC30Q5VVM6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC30Q5VVM6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CCDC30Q5VVM6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC30Q5VVM6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC30Q5VVM6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC30Q5VVM6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC30Q5VVM6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC30Q5VVM6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC30Q5VVM6 ABHD17AP5-201ENST00000580133 923 ntBASIC31.82■■■□□ 2.68
CCDC30Q5VVM6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC30Q5VVM6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms