Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 tD(GUC)J1tD(GUC)J1 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)J2tD(GUC)J2 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)J3tD(GUC)J3 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)J4tD(GUC)J4 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)KtD(GUC)K 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)L1tD(GUC)L1 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)L2tD(GUC)L2 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)MtD(GUC)M 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 tD(GUC)OtD(GUC)O 72 nt10.52□□□□□ -0.73
TY1B-JR2P47100 ORT1YOR130C 879 nt10.52□□□□□ -0.73
TY1B-JR2P47100 PDC5YLR134W 1692 nt10.51□□□□□ -0.73
TY1B-JR2P47100 TDH2YJR009C 999 nt10.51□□□□□ -0.73
TY1B-JR2P47100 YHL018WYHL018W 363 nt10.5□□□□□ -0.73
TY1B-JR2P47100 YLL056CYLL056C 897 nt10.49□□□□□ -0.73
TY1B-JR2P47100 LIP5YOR196C 1245 nt10.49□□□□□ -0.73
TY1B-JR2P47100 snR4snR4 186 nt10.49□□□□□ -0.73
TY1B-JR2P47100 ERG24YNL280C 1317 nt10.49□□□□□ -0.73
TY1B-JR2P47100 SNA3YJL151C 402 nt10.49□□□□□ -0.73
TY1B-JR2P47100 TAE1YBR261C 699 nt10.49□□□□□ -0.73
TY1B-JR2P47100 MAM3YOL060C 2121 nt10.49□□□□□ -0.73
TY1B-JR2P47100 NBA1YOL070C 1506 nt10.49□□□□□ -0.73
TY1B-JR2P47100 YOL099CYOL099C 492 nt10.47□□□□□ -0.73
TY1B-JR2P47100 UIP4YPL186C 915 nt10.47□□□□□ -0.73
TY1B-JR2P47100 HNM1YGL077C 1692 nt10.46□□□□□ -0.73
TY1B-JR2P47100 PGI1YBR196C 1665 nt10.46□□□□□ -0.73
TY1B-JR2P47100 AFG3YER017C 2286 nt10.46□□□□□ -0.74
TY1B-JR2P47100 FMO1YHR176W 1299 nt10.46□□□□□ -0.74
TY1B-JR2P47100 MIM1YOL026C 342 nt10.46□□□□□ -0.74
TY1B-JR2P47100 BEM1YBR200W 1656 nt10.44□□□□□ -0.74
TY1B-JR2P47100 EMP65YER140W 1671 nt10.43□□□□□ -0.74
TY1B-JR2P47100 GPA2YER020W 1350 nt10.42□□□□□ -0.74
TY1B-JR2P47100 YNL097W-AYNL097W-A 156 nt10.42□□□□□ -0.74
TY1B-JR2P47100 ZWF1YNL241C 1518 nt10.41□□□□□ -0.74
TY1B-JR2P47100 HPT1YDR399W 666 nt10.41□□□□□ -0.74
TY1B-JR2P47100 YGL102CYGL102C 429 nt10.41□□□□□ -0.74
TY1B-JR2P47100 HMG2YLR450W 3138 nt10.41□□□□□ -0.74
TY1B-JR2P47100 ICP55YER078C 1536 nt10.4□□□□□ -0.74
TY1B-JR2P47100 HED1YDR014W-A 489 nt10.4□□□□□ -0.74
TY1B-JR2P47100 SMX3YPR182W 261 nt10.4□□□□□ -0.74
TY1B-JR2P47100 VMA3YEL027W 483 nt10.39□□□□□ -0.75
TY1B-JR2P47100 LYS21YDL131W 1323 nt10.39□□□□□ -0.75
TY1B-JR2P47100 ERR1YOR393W 1314 nt10.39□□□□□ -0.75
TY1B-JR2P47100 ERR2YPL281C 1314 nt10.39□□□□□ -0.75
TY1B-JR2P47100 PMT1YDL095W 2454 nt10.39□□□□□ -0.75
TY1B-JR2P47100 REC107YJR021C 945 nt10.38□□□□□ -0.75
TY1B-JR2P47100 ERG27YLR100W 1044 nt10.38□□□□□ -0.75
TY1B-JR2P47100 TPI1YDR050C 747 nt10.37□□□□□ -0.75
TY1B-JR2P47100 CUE4YML101C 354 nt10.37□□□□□ -0.75
TY1B-JR2P47100 MOG1YJR074W 657 nt10.36□□□□□ -0.75
TY1B-JR2P47100 YKL018C-AYKL018C-A 300 nt10.36□□□□□ -0.75
TY1B-JR2P47100 RPL43AYPR043W 279 nt10.36□□□□□ -0.75
TY1B-JR2P47100 PFS2YNL317W 1398 nt10.36□□□□□ -0.75
TY1B-JR2P47100 GTS1YGL181W 1191 nt10.34□□□□□ -0.75
TY1B-JR2P47100 OM45YIL136W 1182 nt10.33□□□□□ -0.76
TY1B-JR2P47100 CDC7YDL017W 1524 nt10.32□□□□□ -0.76
TY1B-JR2P47100 NAS6YGR232W 687 nt10.31□□□□□ -0.76
TY1B-JR2P47100 PRI1YIR008C 1230 nt10.31□□□□□ -0.76
TY1B-JR2P47100 YBR027CYBR027C 333 nt10.31□□□□□ -0.76
TY1B-JR2P47100 IVY1YDR229W 1362 nt10.31□□□□□ -0.76
TY1B-JR2P47100 MRPL10YNL284C 969 nt10.31□□□□□ -0.76
TY1B-JR2P47100 TIF2YJL138C 1188 nt10.3□□□□□ -0.76
TY1B-JR2P47100 TIF1YKR059W 1188 nt10.3□□□□□ -0.76
TY1B-JR2P47100 YMR279CYMR279C 1623 nt10.3□□□□□ -0.76
TY1B-JR2P47100 RAD59YDL059C 717 nt10.29□□□□□ -0.76
TY1B-JR2P47100 YAL045CYAL045C 309 nt10.29□□□□□ -0.76
TY1B-JR2P47100 MRPL23YOR150W 492 nt10.29□□□□□ -0.76
TY1B-JR2P47100 MSP1YGR028W 1089 nt10.28□□□□□ -0.76
TY1B-JR2P47100 PTC7YHR076W 1032 nt10.28□□□□□ -0.76
TY1B-JR2P47100 YHR213W-BYHR213W-B 300 nt10.28□□□□□ -0.76
TY1B-JR2P47100 YKL077WYKL077W 1179 nt10.28□□□□□ -0.76
TY1B-JR2P47100 MHT1YLL062C 975 nt10.28□□□□□ -0.76
TY1B-JR2P47100 YAR064WYAR064W 300 nt10.28□□□□□ -0.76
TY1B-JR2P47100 SEC62YPL094C 825 nt10.28□□□□□ -0.76
TY1B-JR2P47100 CSL4YNL232W 879 nt10.27□□□□□ -0.77
TY1B-JR2P47100 ERG8YMR220W 1356 nt10.27□□□□□ -0.77
TY1B-JR2P47100 CUP2YGL166W 678 nt10.26□□□□□ -0.77
TY1B-JR2P47100 SPG5YMR191W 1122 nt10.26□□□□□ -0.77
TY1B-JR2P47100 DUS3YLR401C 2007 nt10.26□□□□□ -0.77
TY1B-JR2P47100 DLD1YDL174C 1764 nt10.25□□□□□ -0.77
TY1B-JR2P47100 DSF1YEL070W 1509 nt10.25□□□□□ -0.77
TY1B-JR2P47100 YNR073CYNR073C 1509 nt10.25□□□□□ -0.77
TY1B-JR2P47100 THR1YHR025W 1074 nt10.25□□□□□ -0.77
TY1B-JR2P47100 YPR196WYPR196W 1413 nt10.24□□□□□ -0.77
TY1B-JR2P47100 MSS51YLR203C 1311 nt10.24□□□□□ -0.77
TY1B-JR2P47100 SEN34YAR008W 828 nt10.24□□□□□ -0.77
TY1B-JR2P47100 CTA1YDR256C 1548 nt10.23□□□□□ -0.77
TY1B-JR2P47100 DIA4YHR011W 1341 nt10.22□□□□□ -0.77
TY1B-JR2P47100 YBL113CYBL113C 2379 nt10.22□□□□□ -0.77
TY1B-JR2P47100 RNH1YMR234W 1047 nt10.22□□□□□ -0.77
TY1B-JR2P47100 RTC2YBR147W 891 nt10.22□□□□□ -0.77
TY1B-JR2P47100 UIP5YKR044W 1332 nt10.22□□□□□ -0.77
TY1B-JR2P47100 YLR157W-EYLR157W-E 165 nt10.21□□□□□ -0.77
TY1B-JR2P47100 RPL31BYLR406C 342 nt10.21□□□□□ -0.78
TY1B-JR2P47100 EGD2YHR193C 525 nt10.2□□□□□ -0.78
TY1B-JR2P47100 PEX3YDR329C 1326 nt10.2□□□□□ -0.78
TY1B-JR2P47100 DON1YDR273W 1098 nt10.18□□□□□ -0.78
TY1B-JR2P47100 HVG1YER039C 750 nt10.18□□□□□ -0.78
TY1B-JR2P47100 HIS1YER055C 894 nt10.18□□□□□ -0.78
TY1B-JR2P47100 MPC2YHR162W 390 nt10.18□□□□□ -0.78
TY1B-JR2P47100 YRB2YIL063C 984 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 51.8 ms