Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
DLX3O60479 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.46■■□□□ 1.51
DLX3O60479 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
DLX3O60479 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.45■■□□□ 1.51
DLX3O60479 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DLX3O60479 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
DLX3O60479 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DLX3O60479 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.44■■□□□ 1.5
DLX3O60479 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.44■■□□□ 1.5
DLX3O60479 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DLX3O60479 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DLX3O60479 AC145676.1-201ENST00000514988 2004 ntBASIC24.44■■□□□ 1.5
DLX3O60479 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DLX3O60479 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DLX3O60479 AP004609.3-201ENST00000610705 1884 ntBASIC24.43■■□□□ 1.5
DLX3O60479 AC135731.1-201ENST00000569415 2548 ntBASIC24.43■■□□□ 1.5
DLX3O60479 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
DLX3O60479 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DLX3O60479 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DLX3O60479 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
DLX3O60479 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.42■■□□□ 1.5
DLX3O60479 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
DLX3O60479 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DLX3O60479 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.42■■□□□ 1.5
DLX3O60479 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.41■■□□□ 1.5
DLX3O60479 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.41■■□□□ 1.5
DLX3O60479 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
DLX3O60479 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.41■■□□□ 1.5
DLX3O60479 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.4■■□□□ 1.5
DLX3O60479 AC044849.2-201ENST00000606596 710 ntBASIC24.4■■□□□ 1.5
DLX3O60479 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DLX3O60479 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
DLX3O60479 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DLX3O60479 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.38■■□□□ 1.49
DLX3O60479 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
DLX3O60479 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
DLX3O60479 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.38■■□□□ 1.49
DLX3O60479 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DLX3O60479 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DLX3O60479 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DLX3O60479 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DLX3O60479 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
DLX3O60479 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DLX3O60479 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DLX3O60479 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.36■■□□□ 1.49
DLX3O60479 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.35■■□□□ 1.49
DLX3O60479 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
DLX3O60479 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.35■■□□□ 1.49
DLX3O60479 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DLX3O60479 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.35■■□□□ 1.49
DLX3O60479 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
DLX3O60479 AC021231.2-201ENST00000594613 730 ntBASIC24.35■■□□□ 1.49
DLX3O60479 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
DLX3O60479 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DLX3O60479 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DLX3O60479 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DLX3O60479 AC092803.2-201ENST00000564287 1899 ntBASIC24.34■■□□□ 1.49
DLX3O60479 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DLX3O60479 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.33■■□□□ 1.49
DLX3O60479 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
DLX3O60479 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DLX3O60479 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
DLX3O60479 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DLX3O60479 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.32■■□□□ 1.48
DLX3O60479 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DLX3O60479 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
DLX3O60479 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DLX3O60479 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
DLX3O60479 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.31■■□□□ 1.48
DLX3O60479 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
DLX3O60479 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DLX3O60479 AC142472.1-201ENST00000612013 1741 ntBASIC24.3■■□□□ 1.48
DLX3O60479 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DLX3O60479 WHAMMP3-201ENST00000611636 1609 ntBASIC24.3■■□□□ 1.48
DLX3O60479 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.3■■□□□ 1.48
DLX3O60479 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DLX3O60479 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.29■■□□□ 1.48
DLX3O60479 AC020928.2-201ENST00000588717 2197 ntBASIC24.29■■□□□ 1.48
DLX3O60479 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DLX3O60479 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
DLX3O60479 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DLX3O60479 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DLX3O60479 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.28■■□□□ 1.48
DLX3O60479 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DLX3O60479 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DLX3O60479 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.27■■□□□ 1.48
DLX3O60479 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DLX3O60479 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.27■■□□□ 1.48
DLX3O60479 DUX4L29-201ENST00000425409 679 ntBASIC24.26■■□□□ 1.47
DLX3O60479 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DLX3O60479 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DLX3O60479 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DLX3O60479 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms