Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.06■■□□□ 1.44
PEX1O43933 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PEX1O43933 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PEX1O43933 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
PEX1O43933 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
PEX1O43933 HLA-V-202ENST00000446817 847 ntBASIC24.05■■□□□ 1.44
PEX1O43933 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.05■■□□□ 1.44
PEX1O43933 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.04■■□□□ 1.44
PEX1O43933 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
PEX1O43933 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.04■■□□□ 1.44
PEX1O43933 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PEX1O43933 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PEX1O43933 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PEX1O43933 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PEX1O43933 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.03■■□□□ 1.44
PEX1O43933 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PEX1O43933 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PEX1O43933 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PEX1O43933 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.02■■□□□ 1.44
PEX1O43933 AC145676.1-201ENST00000514988 2004 ntBASIC24.02■■□□□ 1.44
PEX1O43933 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PEX1O43933 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.02■■□□□ 1.44
PEX1O43933 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.02■■□□□ 1.44
PEX1O43933 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.01■■□□□ 1.43
PEX1O43933 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PEX1O43933 AP004833.2-201ENST00000532228 1454 ntBASIC24.01■■□□□ 1.43
PEX1O43933 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PEX1O43933 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PEX1O43933 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.01■■□□□ 1.43
PEX1O43933 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PEX1O43933 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24■■□□□ 1.43
PEX1O43933 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PEX1O43933 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.99■■□□□ 1.43
PEX1O43933 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX1O43933 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PEX1O43933 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PEX1O43933 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.98■■□□□ 1.43
PEX1O43933 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX1O43933 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX1O43933 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX1O43933 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.97■■□□□ 1.43
PEX1O43933 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.97■■□□□ 1.43
PEX1O43933 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PEX1O43933 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PEX1O43933 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.97■■□□□ 1.43
PEX1O43933 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.97■■□□□ 1.43
PEX1O43933 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.96■■□□□ 1.43
PEX1O43933 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.96■■□□□ 1.43
PEX1O43933 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.96■■□□□ 1.43
PEX1O43933 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PEX1O43933 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.96■■□□□ 1.43
PEX1O43933 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX1O43933 LINC01971-201ENST00000617888 1048 ntBASIC23.95■■□□□ 1.42
PEX1O43933 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX1O43933 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
PEX1O43933 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
PEX1O43933 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PEX1O43933 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PEX1O43933 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.94■■□□□ 1.42
PEX1O43933 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.94■■□□□ 1.42
PEX1O43933 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX1O43933 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX1O43933 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX1O43933 AC010864.1-201ENST00000609407 1511 ntBASIC23.94■■□□□ 1.42
PEX1O43933 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.93■■□□□ 1.42
PEX1O43933 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PEX1O43933 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PEX1O43933 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PEX1O43933 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.92■■□□□ 1.42
PEX1O43933 DUX4L11-201ENST00000611504 1267 ntBASIC23.92■■□□□ 1.42
PEX1O43933 DUX4L12-201ENST00000614593 1267 ntBASIC23.92■■□□□ 1.42
PEX1O43933 DUX4L14-201ENST00000621227 1267 ntBASIC23.92■■□□□ 1.42
PEX1O43933 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PEX1O43933 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PEX1O43933 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PEX1O43933 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.91■■□□□ 1.42
PEX1O43933 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.91■■□□□ 1.42
PEX1O43933 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PEX1O43933 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PEX1O43933 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PEX1O43933 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PEX1O43933 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PEX1O43933 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
PEX1O43933 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PEX1O43933 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.89■■□□□ 1.42
PEX1O43933 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PEX1O43933 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PEX1O43933 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.88■■□□□ 1.41
PEX1O43933 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PEX1O43933 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PEX1O43933 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
PEX1O43933 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PEX1O43933 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.87■■□□□ 1.41
PEX1O43933 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PEX1O43933 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PEX1O43933 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PEX1O43933 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PEX1O43933 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.86■■□□□ 1.41
PEX1O43933 MIR3648-2-201ENST00000581792 180 ntBASIC23.86■■□□□ 1.41
PEX1O43933 MIR3648-1-201ENST00000615959 180 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms