Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
DDX39AO00148 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.25■■■□□ 2.11
DDX39AO00148 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX39AO00148 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX39AO00148 RARRES2P2-201ENST00000394842 485 ntBASIC28.24■■■□□ 2.11
DDX39AO00148 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX39AO00148 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.23■■■□□ 2.11
DDX39AO00148 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX39AO00148 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DDX39AO00148 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.22■■■□□ 2.11
DDX39AO00148 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.22■■■□□ 2.11
DDX39AO00148 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.21■■■□□ 2.11
DDX39AO00148 RNF126P1-201ENST00000567452 1320 ntBASIC28.21■■■□□ 2.11
DDX39AO00148 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX39AO00148 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.21■■■□□ 2.11
DDX39AO00148 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX39AO00148 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.2■■■□□ 2.1
DDX39AO00148 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX39AO00148 AC018358.1-201ENST00000631079 1402 ntBASIC28.19■■■□□ 2.1
DDX39AO00148 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
DDX39AO00148 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX39AO00148 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
DDX39AO00148 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.18■■■□□ 2.1
DDX39AO00148 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX39AO00148 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
DDX39AO00148 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
DDX39AO00148 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX39AO00148 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX39AO00148 AC126177.7-201ENST00000547904 679 ntBASIC28.16■■■□□ 2.1
DDX39AO00148 AL359258.2-201ENST00000564063 1566 ntBASIC28.16■■■□□ 2.1
DDX39AO00148 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
DDX39AO00148 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX39AO00148 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX39AO00148 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DDX39AO00148 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX39AO00148 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
DDX39AO00148 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
DDX39AO00148 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
DDX39AO00148 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
DDX39AO00148 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DDX39AO00148 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.12■■■□□ 2.09
DDX39AO00148 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX39AO00148 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX39AO00148 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.11■■■□□ 2.09
DDX39AO00148 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
DDX39AO00148 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.11■■■□□ 2.09
DDX39AO00148 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
DDX39AO00148 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX39AO00148 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
DDX39AO00148 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
DDX39AO00148 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
DDX39AO00148 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
DDX39AO00148 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.09■■■□□ 2.09
DDX39AO00148 AC092296.2-201ENST00000589470 999 ntBASIC28.09■■■□□ 2.09
DDX39AO00148 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
DDX39AO00148 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.08■■■□□ 2.09
DDX39AO00148 AL157400.5-201ENST00000507624 621 ntBASIC28.08■■■□□ 2.09
DDX39AO00148 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.08■■■□□ 2.09
DDX39AO00148 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX39AO00148 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.07■■■□□ 2.08
DDX39AO00148 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
DDX39AO00148 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX39AO00148 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DDX39AO00148 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.06■■■□□ 2.08
DDX39AO00148 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX39AO00148 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX39AO00148 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX39AO00148 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX39AO00148 ABHD17AP5-201ENST00000580133 923 ntBASIC28.05■■■□□ 2.08
DDX39AO00148 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX39AO00148 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX39AO00148 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.03■■■□□ 2.08
DDX39AO00148 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DDX39AO00148 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
DDX39AO00148 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DDX39AO00148 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.02■■■□□ 2.08
DDX39AO00148 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DDX39AO00148 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.02■■■□□ 2.08
DDX39AO00148 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.01■■■□□ 2.08
DDX39AO00148 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
DDX39AO00148 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
DDX39AO00148 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX39AO00148 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
DDX39AO00148 LINC01003-201ENST00000564834 1764 ntBASIC28.01■■■□□ 2.07
DDX39AO00148 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DDX39AO00148 ECEL1P2-201ENST00000461596 1295 ntBASIC28■■■□□ 2.07
DDX39AO00148 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28■■■□□ 2.07
DDX39AO00148 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28■■■□□ 2.07
DDX39AO00148 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28■■■□□ 2.07
DDX39AO00148 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
DDX39AO00148 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
DDX39AO00148 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
DDX39AO00148 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.99■■■□□ 2.07
DDX39AO00148 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.99■■■□□ 2.07
DDX39AO00148 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
DDX39AO00148 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX39AO00148 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX39AO00148 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX39AO00148 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX39AO00148 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms