Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.51■■■□□ 2.47
USP17L3A6NCW0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.51■■■□□ 2.47
USP17L3A6NCW0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
USP17L3A6NCW0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.5■■■□□ 2.47
USP17L3A6NCW0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
USP17L3A6NCW0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.5■■■□□ 2.47
USP17L3A6NCW0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
USP17L3A6NCW0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
USP17L3A6NCW0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.49■■■□□ 2.47
USP17L3A6NCW0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USP17L3A6NCW0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.49■■■□□ 2.47
USP17L3A6NCW0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.49■■■□□ 2.47
USP17L3A6NCW0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USP17L3A6NCW0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
USP17L3A6NCW0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.48■■■□□ 2.47
USP17L3A6NCW0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
USP17L3A6NCW0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 AC026202.3-201ENST00000600805 1127 ntBASIC30.47■■■□□ 2.47
USP17L3A6NCW0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
USP17L3A6NCW0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
USP17L3A6NCW0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
USP17L3A6NCW0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
USP17L3A6NCW0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.44■■■□□ 2.46
USP17L3A6NCW0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
USP17L3A6NCW0 AC025884.2-201ENST00000553429 711 ntBASIC30.44■■■□□ 2.46
USP17L3A6NCW0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.44■■■□□ 2.46
USP17L3A6NCW0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.43■■■□□ 2.46
USP17L3A6NCW0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
USP17L3A6NCW0 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.43■■■□□ 2.46
USP17L3A6NCW0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.43■■■□□ 2.46
USP17L3A6NCW0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.43■■■□□ 2.46
USP17L3A6NCW0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.42■■■□□ 2.46
USP17L3A6NCW0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.41■■■□□ 2.46
USP17L3A6NCW0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
USP17L3A6NCW0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
USP17L3A6NCW0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
USP17L3A6NCW0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
USP17L3A6NCW0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
USP17L3A6NCW0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
USP17L3A6NCW0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
USP17L3A6NCW0 RP9P-202ENST00000450133 1212 ntBASIC30.38■■■□□ 2.45
USP17L3A6NCW0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
USP17L3A6NCW0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.38■■■□□ 2.45
USP17L3A6NCW0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
USP17L3A6NCW0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
USP17L3A6NCW0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
USP17L3A6NCW0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.37■■■□□ 2.45
USP17L3A6NCW0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP17L3A6NCW0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USP17L3A6NCW0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
USP17L3A6NCW0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP17L3A6NCW0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.34■■■□□ 2.45
USP17L3A6NCW0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
USP17L3A6NCW0 DUX4L9-201ENST00000449051 1259 ntBASIC30.33■■■□□ 2.45
USP17L3A6NCW0 AC093536.1-201ENST00000569153 554 ntBASIC30.33■■■□□ 2.45
USP17L3A6NCW0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
USP17L3A6NCW0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP17L3A6NCW0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP17L3A6NCW0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.31■■■□□ 2.44
USP17L3A6NCW0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
USP17L3A6NCW0 RAP2CP1-202ENST00000605179 643 ntBASIC30.31■■■□□ 2.44
USP17L3A6NCW0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.3■■■□□ 2.44
USP17L3A6NCW0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.3■■■□□ 2.44
USP17L3A6NCW0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP17L3A6NCW0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP17L3A6NCW0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.29■■■□□ 2.44
USP17L3A6NCW0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP17L3A6NCW0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP17L3A6NCW0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.28■■■□□ 2.44
USP17L3A6NCW0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
USP17L3A6NCW0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
USP17L3A6NCW0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP17L3A6NCW0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP17L3A6NCW0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.27■■■□□ 2.44
USP17L3A6NCW0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.27■■■□□ 2.44
USP17L3A6NCW0 AL035685.1-201ENST00000636663 812 ntBASIC30.27■■■□□ 2.44
USP17L3A6NCW0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.27■■■□□ 2.44
USP17L3A6NCW0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
USP17L3A6NCW0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.44
USP17L3A6NCW0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.26■■■□□ 2.43
USP17L3A6NCW0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.26■■■□□ 2.43
USP17L3A6NCW0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.26■■■□□ 2.43
USP17L3A6NCW0 AL451085.2-201ENST00000605085 799 ntBASIC30.26■■■□□ 2.43
USP17L3A6NCW0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP17L3A6NCW0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms