Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CD177P1-201ENST00000606252 935 ntBASIC17.47■□□□□ 0.39
GPC6Q9Y625 AL049637.2-201ENST00000641778 930 ntBASIC17.47■□□□□ 0.39
GPC6Q9Y625 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.46■□□□□ 0.39
GPC6Q9Y625 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 Z99916.2-201ENST00000604037 246 ntBASIC17.46■□□□□ 0.39
GPC6Q9Y625 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.46■□□□□ 0.39
GPC6Q9Y625 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GPC6Q9Y625 KRT8P3-201ENST00000519669 1449 ntBASIC17.46■□□□□ 0.39
GPC6Q9Y625 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.46■□□□□ 0.38
GPC6Q9Y625 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
GPC6Q9Y625 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 AC126763.1-201ENST00000552015 2118 ntBASIC17.45■□□□□ 0.38
GPC6Q9Y625 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 KRT8P32-201ENST00000512863 1461 ntBASIC17.45■□□□□ 0.38
GPC6Q9Y625 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 FAM197Y1-201ENST00000421178 764 ntBASIC17.45■□□□□ 0.38
GPC6Q9Y625 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 AC113410.3-201ENST00000623366 203 ntBASIC17.45■□□□□ 0.38
GPC6Q9Y625 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
GPC6Q9Y625 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GPC6Q9Y625 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms