Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 TSPY19P-201ENST00000418461 509 ntBASIC20.81■□□□□ 0.92
COL20A1Q9P218 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 TSPY18P-201ENST00000441642 509 ntBASIC20.81■□□□□ 0.92
COL20A1Q9P218 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 RN7SL510P-201ENST00000581311 263 ntBASIC20.81■□□□□ 0.92
COL20A1Q9P218 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.81■□□□□ 0.92
COL20A1Q9P218 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
COL20A1Q9P218 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL20A1Q9P218 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 IGHV3-47-201ENST00000425060 335 ntBASIC20.8■□□□□ 0.92
COL20A1Q9P218 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 FOSL1P1-201ENST00000511041 816 ntBASIC20.8■□□□□ 0.92
COL20A1Q9P218 AC074051.2-201ENST00000565115 352 ntBASIC20.8■□□□□ 0.92
COL20A1Q9P218 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL20A1Q9P218 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL20A1Q9P218 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 GUSBP12-201ENST00000513727 720 ntBASIC20.79■□□□□ 0.92
COL20A1Q9P218 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.79■□□□□ 0.92
COL20A1Q9P218 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL20A1Q9P218 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 KRT17P6-201ENST00000453795 1220 ntBASIC20.78■□□□□ 0.92
COL20A1Q9P218 AC113404.2-201ENST00000507884 177 ntBASIC20.78■□□□□ 0.92
COL20A1Q9P218 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 IFNL4P1-201ENST00000607083 540 ntBASIC20.78■□□□□ 0.92
COL20A1Q9P218 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL20A1Q9P218 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.78■□□□□ 0.92
COL20A1Q9P218 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.77■□□□□ 0.92
COL20A1Q9P218 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL20A1Q9P218 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms