Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 BICD1-207ENST00000551848 1962 ntBASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKIPSDQ9NZQ3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 AP003041.3-201ENST00000527151 707 ntBASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKIPSDQ9NZQ3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 AC008622.2-201ENST00000617006 1229 ntBASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKIPSDQ9NZQ3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NCKIPSDQ9NZQ3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 TSPY23P-201ENST00000440136 739 ntBASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.64■□□□□ 0.57
NCKIPSDQ9NZQ3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms