Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PARPBPQ9NWS1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 AC112777.1-201ENST00000540175 1423 ntBASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PARPBPQ9NWS1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC093525.10-201ENST00000625130 1569 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 TMPOP1-202ENST00000424642 1267 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 KRT18P23-201ENST00000435622 1283 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 KRT18P57-201ENST00000443599 1254 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 FAM210CP-201ENST00000445714 574 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 KRT18P41-201ENST00000518924 1277 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC009065.1-201ENST00000564055 1225 ntBASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PARPBPQ9NWS1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 RCN1P1-201ENST00000400413 996 ntBASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 KRT18P21-201ENST00000515767 1272 ntBASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.5■□□□□ 0.23
PARPBPQ9NWS1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms