Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 AC008040.2-201ENST00000461049 708 ntBASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 AP000692.2-201ENST00000608391 879 ntBASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
ATAD3AQ9NVI7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ATAD3AQ9NVI7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.71■□□□□ 0.42
ATAD3AQ9NVI7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 CD177P1-201ENST00000606252 935 ntBASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 DGCR10-201ENST00000609839 495 ntBASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 ABALON-201ENST00000629058 1903 ntBASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATAD3AQ9NVI7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AL499627.1-201ENST00000569373 2188 ntBASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AL109659.2-201ENST00000606809 1674 ntBASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 FAM197Y1-201ENST00000421178 764 ntBASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 AP001412.1-201ENST00000608405 714 ntBASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATAD3AQ9NVI7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATAD3AQ9NVI7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
ATAD3AQ9NVI7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATAD3AQ9NVI7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATAD3AQ9NVI7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ATAD3AQ9NVI7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms