Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SPTLC3Q9NUV7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC3Q9NUV7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC3Q9NUV7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPTLC3Q9NUV7 AC011270.2-201ENST00000624293 2550 ntBASIC20.32■□□□□ 0.84
SPTLC3Q9NUV7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AC006116.8-202ENST00000587620 1550 ntBASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AC069152.1-201ENST00000438030 544 ntBASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 AL023806.1-201ENST00000603994 1649 ntBASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPTLC3Q9NUV7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 C1QL1P1-201ENST00000568105 661 ntBASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 AL109923.1-201ENST00000618799 583 ntBASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC3Q9NUV7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 POM121L13P-201ENST00000422362 380 ntBASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms