Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 POLD2P1-201ENST00000511220 997 ntBASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRMT13Q9NUP7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 AC018712.1-201ENST00000455767 687 ntBASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 KRT18P58-201ENST00000527480 1120 ntBASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 AC005336.2-201ENST00000593183 939 ntBASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TRMT13Q9NUP7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 RNPS1P1-201ENST00000507437 918 ntBASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 MIR7706-201ENST00000613747 67 ntBASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 AC007952.6-201ENST00000573168 2673 ntBASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 AC003957.1-201ENST00000625108 2673 ntBASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.18■□□□□ 0.82
TRMT13Q9NUP7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 AC093909.1-201ENST00000504731 1122 ntBASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 AC106730.1-201ENST00000566722 1090 ntBASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.17■□□□□ 0.82
TRMT13Q9NUP7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.16■□□□□ 0.82
TRMT13Q9NUP7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.16■□□□□ 0.82
TRMT13Q9NUP7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRMT13Q9NUP7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.16■□□□□ 0.82
TRMT13Q9NUP7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms