Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AL137013.1-201ENST00000432946 1228 ntBASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBQLN4Q9NRR5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 MIR149-201ENST00000384879 89 ntBASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AC010203.1-204ENST00000548782 407 ntBASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AC024243.1-201ENST00000609234 778 ntBASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AL031432.5-201ENST00000641059 760 ntBASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 AC009102.3-201ENST00000623118 1491 ntBASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
UBQLN4Q9NRR5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UBQLN4Q9NRR5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 AL162741.1-201ENST00000565563 1558 ntBASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 SEC1P-202ENST00000473944 940 ntBASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 AC010240.3-201ENST00000607688 395 ntBASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 AC092865.7-201ENST00000641832 219 ntBASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBQLN4Q9NRR5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN4Q9NRR5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms