Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 AL499627.1-201ENST00000569373 2188 ntBASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 MIR149-201ENST00000384879 89 ntBASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 STARP1-201ENST00000397973 869 ntBASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.42■□□□□ 0.38
PRDM9Q9NQV7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 AC005082.1-201ENST00000413042 2259 ntBASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 AC126763.1-201ENST00000552015 2118 ntBASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRDM9Q9NQV7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 AL359075.1-203ENST00000462729 1002 ntBASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 NTF6B-201ENST00000591913 560 ntBASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 AC010240.3-201ENST00000607688 395 ntBASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRDM9Q9NQV7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms