Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 MCCD1P1-208ENST00000445732 328 ntBASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 AC073195.1-201ENST00000607241 877 ntBASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 AC093010.1-201ENST00000473625 1624 ntBASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 AL163051.1-201ENST00000569214 1512 ntBASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 KRT18P55-202ENST00000578578 1546 ntBASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC52A3Q9NQ40 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
SLC52A3Q9NQ40 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 KRT18P6-201ENST00000555540 1265 ntBASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 AC036111.1-201ENST00000533973 1582 ntBASIC17.45■□□□□ 0.38
SLC52A3Q9NQ40 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AC141586.5-201ENST00000624546 2050 ntBASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 PCDHA12-202ENST00000613593 2588 ntBASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 RARRES2P10-201ENST00000564312 460 ntBASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms