Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC006011.2-201ENST00000621313 1158 ntBASIC15.77■□□□□ 0.12
GCM1Q9NP62 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GCM1Q9NP62 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GCM1Q9NP62 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GCM1Q9NP62 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.77■□□□□ 0.11
GCM1Q9NP62 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.77■□□□□ 0.11
GCM1Q9NP62 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GCM1Q9NP62 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
GCM1Q9NP62 BX323043.1-201ENST00000641006 1765 ntBASIC15.77■□□□□ 0.11
GCM1Q9NP62 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GCM1Q9NP62 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 AC104076.2-201ENST00000448912 469 ntBASIC15.76■□□□□ 0.11
GCM1Q9NP62 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 AC140113.3-201ENST00000605663 199 ntBASIC15.76■□□□□ 0.11
GCM1Q9NP62 AC139887.4-201ENST00000607877 719 ntBASIC15.76■□□□□ 0.11
GCM1Q9NP62 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GCM1Q9NP62 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GCM1Q9NP62 AC034236.2-201ENST00000606662 1610 ntBASIC15.76■□□□□ 0.11
GCM1Q9NP62 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 Z98044.1-201ENST00000632503 1764 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 AC117947.1-201ENST00000427448 529 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 YBX1P2-201ENST00000489612 999 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 AC098818.2-201ENST00000564925 2320 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.75■□□□□ 0.11
GCM1Q9NP62 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
GCM1Q9NP62 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
GCM1Q9NP62 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GCM1Q9NP62 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 AK4P3-201ENST00000418260 669 ntBASIC15.74■□□□□ 0.11
GCM1Q9NP62 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.74■□□□□ 0.11
GCM1Q9NP62 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.74■□□□□ 0.11
GCM1Q9NP62 AC011558.1-201ENST00000623459 338 ntBASIC15.74■□□□□ 0.11
GCM1Q9NP62 AL023973.1-201ENST00000624619 620 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms