Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 MIR564-202ENST00000385049 94 ntBASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 FAAHP1-202ENST00000446499 1238 ntBASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 LINC00265-3P-201ENST00000447588 903 ntBASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 FDX1P1-201ENST00000449115 551 ntBASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 AP000867.3-201ENST00000524675 377 ntBASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF3Q9HD45 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 AL032819.2-201ENST00000624543 2162 ntBASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 Z83836.1-201ENST00000624605 1642 ntBASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 IFNL4P1-201ENST00000607083 540 ntBASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF3Q9HD45 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 KRT17P6-201ENST00000453795 1220 ntBASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TOB2P1-201ENST00000469761 992 ntBASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 AL732292.2-201ENST00000609649 430 ntBASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF3Q9HD45 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms