Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 SDHAP2-201ENST00000455183 2001 ntBASIC17.64■□□□□ 0.41
BRF2Q9HAW0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 AC104390.1-201ENST00000555663 520 ntBASIC17.64■□□□□ 0.41
BRF2Q9HAW0 NAPSB-206ENST00000562112 1266 ntBASIC17.64■□□□□ 0.41
BRF2Q9HAW0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRF2Q9HAW0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 MMP23A-201ENST00000234610 1017 ntBASIC17.63■□□□□ 0.41
BRF2Q9HAW0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 AL512604.3-201ENST00000569583 964 ntBASIC17.63■□□□□ 0.41
BRF2Q9HAW0 AC112497.1-201ENST00000624824 639 ntBASIC17.63■□□□□ 0.41
BRF2Q9HAW0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
BRF2Q9HAW0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 AC010947.1-201ENST00000623454 693 ntBASIC17.62■□□□□ 0.41
BRF2Q9HAW0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.62■□□□□ 0.41
BRF2Q9HAW0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BRF2Q9HAW0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms