Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A3Q9H7F0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A3Q9H7F0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP13A3Q9H7F0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A3Q9H7F0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP13A3Q9H7F0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP13A3Q9H7F0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 MIR149-201ENST00000384879 89 ntBASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 LINC01311-201ENST00000565162 1445 ntBASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP13A3Q9H7F0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 AL031133.1-201ENST00000406807 723 ntBASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATP13A3Q9H7F0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 AC009102.3-201ENST00000623118 1491 ntBASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 HBZP1-201ENST00000354915 429 ntBASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP13A3Q9H7F0 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms