Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CR769767.2-201ENST00000622735 460 ntBASIC17.11■□□□□ 0.33
UBQLN3Q9H347 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN3Q9H347 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 YBX1P2-201ENST00000489612 999 ntBASIC17.1■□□□□ 0.33
UBQLN3Q9H347 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 NEK4P2-201ENST00000580004 1012 ntBASIC17.1■□□□□ 0.33
UBQLN3Q9H347 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN3Q9H347 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 RNF152P1-201ENST00000397754 604 ntBASIC17.09■□□□□ 0.33
UBQLN3Q9H347 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AC063952.2-201ENST00000498792 1227 ntBASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AL445228.2-201ENST00000605589 952 ntBASIC17.09■□□□□ 0.33
UBQLN3Q9H347 AL031432.5-201ENST00000641059 760 ntBASIC17.09■□□□□ 0.33
UBQLN3Q9H347 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 NOC2LP1-202ENST00000452600 2235 ntBASIC17.09■□□□□ 0.33
UBQLN3Q9H347 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN3Q9H347 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.08■□□□□ 0.33
UBQLN3Q9H347 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN3Q9H347 AC073592.3-201ENST00000625118 1834 ntBASIC17.08■□□□□ 0.33
UBQLN3Q9H347 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 AC009947.2-201ENST00000444014 672 ntBASIC17.08■□□□□ 0.32
UBQLN3Q9H347 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms