Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX47Q9H0S4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 FLJ13224-201ENST00000313737 1514 ntBASIC19.23■□□□□ 0.67
DDX47Q9H0S4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX47Q9H0S4 AL096828.2-201ENST00000567259 1965 ntBASIC19.23■□□□□ 0.67
DDX47Q9H0S4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 NIFKP9-201ENST00000419265 221 ntBASIC19.22■□□□□ 0.67
DDX47Q9H0S4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 AC099343.3-201ENST00000605834 2503 ntBASIC19.22■□□□□ 0.67
DDX47Q9H0S4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 BCL2-203ENST00000589955 5011 ntBASIC19.22■□□□□ 0.67
DDX47Q9H0S4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX47Q9H0S4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 KRT18P41-201ENST00000518924 1277 ntBASIC19.21■□□□□ 0.67
DDX47Q9H0S4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX47Q9H0S4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms