Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD4Q9H0A8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 AC239809.2-201ENST00000415381 517 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 MTDHP1-201ENST00000605323 784 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 AC069544.1-201ENST00000609399 999 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 AL445675.2-201ENST00000620291 557 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 AC138028.4-201ENST00000564984 1845 ntBASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD4Q9H0A8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 NFIC-211ENST00000641145 8399 ntBASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 ID1-201ENST00000376105 1233 ntBASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 SLC25A6P5-201ENST00000435663 894 ntBASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 AP003097.1-201ENST00000530657 1135 ntBASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 AC093677.2-201ENST00000600169 1863 ntBASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms