Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 AL109923.1-201ENST00000618799 583 ntBASIC14.97□□□□□ -0.01
RAB40CQ96S21 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 HLA-A-209ENST00000638375 975 ntBASIC14.97□□□□□ -0.01
RAB40CQ96S21 HLA-B-256ENST00000639848 1089 ntBASIC14.97□□□□□ -0.01
RAB40CQ96S21 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40CQ96S21 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB40CQ96S21 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 MYLKP1-201ENST00000509077 1580 ntBASIC14.96□□□□□ -0.01
RAB40CQ96S21 KRT8P3-201ENST00000519669 1449 ntBASIC14.96□□□□□ -0.01
RAB40CQ96S21 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 MIR4758-201ENST00000577688 71 ntBASIC14.96□□□□□ -0.01
RAB40CQ96S21 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40CQ96S21 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40CQ96S21 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
RAB40CQ96S21 KRT8P41-201ENST00000533985 1514 ntBASIC14.96□□□□□ -0.02
RAB40CQ96S21 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40CQ96S21 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40CQ96S21 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
RAB40CQ96S21 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40CQ96S21 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40CQ96S21 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAB40CQ96S21 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms