Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC019129.2-201ENST00000609837 1235 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TP53TG3HP-202ENST00000569755 579 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC006504.4-201ENST00000592118 1568 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 ABCD1P5-201ENST00000445663 754 ntBASIC5.59□□□□□ -1.52
HMCN1Q96RW7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC5.59□□□□□ -1.52
HMCN1Q96RW7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RAB43P1-201ENST00000561790 589 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC084121.4-201ENST00000641598 221 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AF228730.8-201ENST00000642140 221 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC125807.1-201ENST00000483097 614 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 MIR6869-201ENST00000619434 62 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 FEM1AP1-201ENST00000431297 1995 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 DDX43P3-201ENST00000441064 443 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 MIR4722-201ENST00000578292 60 ntBASIC5.58□□□□□ -1.52
HMCN1Q96RW7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms