Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AC005082.1-201ENST00000413042 2259 ntBASIC18.99■□□□□ 0.63
RPRD1AQ96P16 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 ZNF444P1-201ENST00000559497 298 ntBASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AL121956.5-201ENST00000625261 221 ntBASIC18.99■□□□□ 0.63
RPRD1AQ96P16 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AL391807.1-203ENST00000604392 2365 ntBASIC18.99■□□□□ 0.63
RPRD1AQ96P16 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 AC009102.3-201ENST00000623118 1491 ntBASIC18.98■□□□□ 0.63
RPRD1AQ96P16 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 MIR149-201ENST00000384879 89 ntBASIC18.98■□□□□ 0.63
RPRD1AQ96P16 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 PVRIG2P-201ENST00000435460 978 ntBASIC18.98■□□□□ 0.63
RPRD1AQ96P16 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 AC126763.1-201ENST00000552015 2118 ntBASIC18.98■□□□□ 0.63
RPRD1AQ96P16 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPRD1AQ96P16 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPRD1AQ96P16 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 BCL2-203ENST00000589955 5011 ntBASIC18.96■□□□□ 0.63
RPRD1AQ96P16 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 VENTXP5-201ENST00000523979 775 ntBASIC18.96■□□□□ 0.63
RPRD1AQ96P16 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms