Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.61■□□□□ 0.09
SPG11Q96JI7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 GPX1P2-201ENST00000429271 606 ntBASIC15.6■□□□□ 0.09
SPG11Q96JI7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.6■□□□□ 0.09
SPG11Q96JI7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 MTDHP3-201ENST00000594186 672 ntBASIC15.6■□□□□ 0.09
SPG11Q96JI7 AC008735.5-201ENST00000623544 497 ntBASIC15.6■□□□□ 0.09
SPG11Q96JI7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 LINC01521-201ENST00000504184 1943 ntBASIC15.6■□□□□ 0.09
SPG11Q96JI7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPG11Q96JI7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.6■□□□□ 0.09
SPG11Q96JI7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.59■□□□□ 0.09
SPG11Q96JI7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 RCC2P3-201ENST00000418112 1537 ntBASIC15.59■□□□□ 0.09
SPG11Q96JI7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 AC012640.2-201ENST00000561606 901 ntBASIC15.59■□□□□ 0.09
SPG11Q96JI7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPG11Q96JI7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SPG11Q96JI7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPG11Q96JI7 TEX21P-204ENST00000641479 1693 ntBASIC15.58■□□□□ 0.09
SPG11Q96JI7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPG11Q96JI7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPG11Q96JI7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
SPG11Q96JI7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.58■□□□□ 0.09
SPG11Q96JI7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
SPG11Q96JI7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SPG11Q96JI7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
SPG11Q96JI7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
SPG11Q96JI7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPG11Q96JI7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.58■□□□□ 0.08
SPG11Q96JI7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms