Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CARFQ8N187 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.46■□□□□ 0.38
CARFQ8N187 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.45■□□□□ 0.38
CARFQ8N187 AC233702.3-201ENST00000578656 1387 ntBASIC17.45■□□□□ 0.38
CARFQ8N187 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CARFQ8N187 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.45■□□□□ 0.38
CARFQ8N187 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.45■□□□□ 0.38
CARFQ8N187 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.45■□□□□ 0.38
CARFQ8N187 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.45■□□□□ 0.38
CARFQ8N187 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.45■□□□□ 0.38
CARFQ8N187 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CARFQ8N187 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CARFQ8N187 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CARFQ8N187 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.44■□□□□ 0.38
CARFQ8N187 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.44■□□□□ 0.38
CARFQ8N187 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CARFQ8N187 AC104819.1-201ENST00000504587 486 ntBASIC17.44■□□□□ 0.38
CARFQ8N187 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 AC124864.1-201ENST00000623408 392 ntBASIC17.44■□□□□ 0.38
CARFQ8N187 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.44■□□□□ 0.38
CARFQ8N187 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.44■□□□□ 0.38
CARFQ8N187 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CARFQ8N187 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.44■□□□□ 0.38
CARFQ8N187 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
CARFQ8N187 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CARFQ8N187 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.43■□□□□ 0.38
CARFQ8N187 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CARFQ8N187 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.43■□□□□ 0.38
CARFQ8N187 AC011840.4-201ENST00000578471 627 ntBASIC17.43■□□□□ 0.38
CARFQ8N187 AL121772.3-201ENST00000610840 674 ntBASIC17.43■□□□□ 0.38
CARFQ8N187 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 AC009154.2-201ENST00000621177 724 ntBASIC17.43■□□□□ 0.38
CARFQ8N187 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CARFQ8N187 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.43■□□□□ 0.38
CARFQ8N187 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.43■□□□□ 0.38
CARFQ8N187 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
CARFQ8N187 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CARFQ8N187 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.42■□□□□ 0.38
CARFQ8N187 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.42■□□□□ 0.38
CARFQ8N187 TSPY12P-201ENST00000421279 868 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 TPM4P1-201ENST00000436100 807 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CARFQ8N187 KRT17P6-201ENST00000453795 1220 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CARFQ8N187 AP000867.3-201ENST00000524675 377 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.42■□□□□ 0.38
CARFQ8N187 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.42■□□□□ 0.38
CARFQ8N187 AC111152.3-201ENST00000569699 673 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.42■□□□□ 0.38
CARFQ8N187 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.42■□□□□ 0.38
CARFQ8N187 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.42■□□□□ 0.38
CARFQ8N187 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.42■□□□□ 0.38
CARFQ8N187 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CARFQ8N187 AL499627.1-201ENST00000569373 2188 ntBASIC17.42■□□□□ 0.38
CARFQ8N187 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CARFQ8N187 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CARFQ8N187 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
CARFQ8N187 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms