Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 KRT18P41-201ENST00000518924 1277 ntBASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
TRIM50Q86XT4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 RN7SL510P-201ENST00000581311 263 ntBASIC20.54■□□□□ 0.88
TRIM50Q86XT4 AL732292.2-201ENST00000609649 430 ntBASIC20.54■□□□□ 0.88
TRIM50Q86XT4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRIM50Q86XT4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM50Q86XT4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AL592071.1-201ENST00000611956 408 ntBASIC20.52■□□□□ 0.88
TRIM50Q86XT4 IGHV3-41-201ENST00000613121 348 ntBASIC20.52■□□□□ 0.88
TRIM50Q86XT4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM50Q86XT4 LINC00167-201ENST00000530583 1419 ntBASIC20.52■□□□□ 0.87
TRIM50Q86XT4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM50Q86XT4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM50Q86XT4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms