Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 BX323043.1-201ENST00000641006 1765 ntBASIC14.88□□□□□ -0.03
C9orf139Q6ZV77 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.88□□□□□ -0.03
C9orf139Q6ZV77 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C9orf139Q6ZV77 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C9orf139Q6ZV77 AL357033.4-201ENST00000617703 1807 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AC005332.7-201ENST00000614046 2005 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 KRT17P6-201ENST00000453795 1220 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 GUSBP12-201ENST00000513727 720 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AP000867.3-201ENST00000524675 377 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AC008687.5-201ENST00000593746 558 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 IGHV3-41-201ENST00000613121 348 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AC093484.2-201ENST00000580996 2166 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 AL032819.2-201ENST00000624543 2162 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 MTMR9LP-203ENST00000426597 1545 ntBASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C9orf139Q6ZV77 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 AC104819.1-201ENST00000504587 486 ntBASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 Z69720.1-201ENST00000601483 472 ntBASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
C9orf139Q6ZV77 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.85□□□□□ -0.03
C9orf139Q6ZV77 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.85□□□□□ -0.03
C9orf139Q6ZV77 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
C9orf139Q6ZV77 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms