Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 AC105020.1-201ENST00000435356 2205 ntBASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LINC00173Q6ZV60 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 AC103702.1-201ENST00000548801 2630 ntBASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00173Q6ZV60 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 AC116351.2-201ENST00000606540 1585 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 KRT18P14-201ENST00000534205 1250 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 KRT18P61-201ENST00000585825 1298 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 AC100791.3-201ENST00000617619 330 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 AC010536.3-201ENST00000620306 533 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 CROCCP1-201ENST00000426910 5675 ntBASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00173Q6ZV60 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 KRT19P1-201ENST00000405746 1186 ntBASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AC007322.4-201ENST00000509611 723 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms