Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KRT40Q6A162 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 AC022616.7-201ENST00000525383 220 ntBASIC21.36■■□□□ 1.01
KRT40Q6A162 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 FAM87A-204ENST00000613235 858 ntBASIC21.36■■□□□ 1.01
KRT40Q6A162 AC099343.3-201ENST00000605834 2503 ntBASIC21.36■■□□□ 1.01
KRT40Q6A162 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
KRT40Q6A162 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
KRT40Q6A162 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KRT40Q6A162 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT40Q6A162 AC128688.1-201ENST00000487626 519 ntBASIC21.35■■□□□ 1.01
KRT40Q6A162 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
KRT40Q6A162 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT40Q6A162 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 HOXB1-202ENST00000577092 1414 ntBASIC21.35■■□□□ 1.01
KRT40Q6A162 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT40Q6A162 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT40Q6A162 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT40Q6A162 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.34■■□□□ 1.01
KRT40Q6A162 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 KRT18P23-201ENST00000435622 1283 ntBASIC21.34■■□□□ 1.01
KRT40Q6A162 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT40Q6A162 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT40Q6A162 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT40Q6A162 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.34■■□□□ 1.01
KRT40Q6A162 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KRT40Q6A162 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT40Q6A162 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.33■■□□□ 1.01
KRT40Q6A162 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KRT40Q6A162 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.33■■□□□ 1.01
KRT40Q6A162 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT40Q6A162 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT40Q6A162 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT40Q6A162 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.33■■□□□ 1
KRT40Q6A162 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.33■■□□□ 1
KRT40Q6A162 AC135776.1-201ENST00000319817 2481 ntBASIC21.33■■□□□ 1
KRT40Q6A162 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.33■■□□□ 1
KRT40Q6A162 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
KRT40Q6A162 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.33■■□□□ 1
KRT40Q6A162 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.33■■□□□ 1
KRT40Q6A162 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
KRT40Q6A162 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRT40Q6A162 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.32■■□□□ 1
KRT40Q6A162 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms