Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 RPPH1-201ENST00000516869 333 ntBASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRIF1Q5T3J3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRIF1Q5T3J3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.39■□□□□ 0.38
LRIF1Q5T3J3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRIF1Q5T3J3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRIF1Q5T3J3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms