Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GCNT1Q02742 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GCNT1Q02742 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GCNT1Q02742 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GCNT1Q02742 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GCNT1Q02742 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GCNT1Q02742 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 AC099343.3-201ENST00000605834 2503 ntBASIC19.69■□□□□ 0.74
GCNT1Q02742 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 AC211429.1-201ENST00000415277 523 ntBASIC19.69■□□□□ 0.74
GCNT1Q02742 LIN28AP1-201ENST00000429574 405 ntBASIC19.69■□□□□ 0.74
GCNT1Q02742 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.69■□□□□ 0.74
GCNT1Q02742 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.69■□□□□ 0.74
GCNT1Q02742 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.69■□□□□ 0.74
GCNT1Q02742 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.69■□□□□ 0.74
GCNT1Q02742 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GCNT1Q02742 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.68■□□□□ 0.74
GCNT1Q02742 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
GCNT1Q02742 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 ATP5G1P1-201ENST00000448724 379 ntBASIC19.68■□□□□ 0.74
GCNT1Q02742 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.68■□□□□ 0.74
GCNT1Q02742 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.68■□□□□ 0.74
GCNT1Q02742 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.68■□□□□ 0.74
GCNT1Q02742 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
GCNT1Q02742 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.68■□□□□ 0.74
GCNT1Q02742 LINC01023-201ENST00000606054 436 ntBASIC19.68■□□□□ 0.74
GCNT1Q02742 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.68■□□□□ 0.74
GCNT1Q02742 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
GCNT1Q02742 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GCNT1Q02742 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GCNT1Q02742 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.67■□□□□ 0.74
GCNT1Q02742 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GCNT1Q02742 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
GCNT1Q02742 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GCNT1Q02742 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GCNT1Q02742 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GCNT1Q02742 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.67■□□□□ 0.74
GCNT1Q02742 AL137013.1-201ENST00000432946 1228 ntBASIC19.67■□□□□ 0.74
GCNT1Q02742 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.67■□□□□ 0.74
GCNT1Q02742 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.67■□□□□ 0.74
GCNT1Q02742 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
GCNT1Q02742 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.67■□□□□ 0.74
GCNT1Q02742 AL031432.5-201ENST00000641059 760 ntBASIC19.67■□□□□ 0.74
GCNT1Q02742 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
GCNT1Q02742 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.67■□□□□ 0.74
GCNT1Q02742 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GCNT1Q02742 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms