Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX6-1P78426 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-1P78426 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 AC005332.7-201ENST00000614046 2005 ntBASIC16.25■□□□□ 0.19
NKX6-1P78426 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.25■□□□□ 0.19
NKX6-1P78426 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-1P78426 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.25■□□□□ 0.19
NKX6-1P78426 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-1P78426 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-1P78426 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 LINC01311-201ENST00000565162 1445 ntBASIC16.25■□□□□ 0.19
NKX6-1P78426 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.25■□□□□ 0.19
NKX6-1P78426 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-1P78426 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-1P78426 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-1P78426 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-1P78426 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
NKX6-1P78426 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-1P78426 ATP5G2P1-201ENST00000433580 426 ntBASIC16.24■□□□□ 0.19
NKX6-1P78426 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.24■□□□□ 0.19
NKX6-1P78426 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-1P78426 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.24■□□□□ 0.19
NKX6-1P78426 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX6-1P78426 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NKX6-1P78426 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX6-1P78426 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-1P78426 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-1P78426 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-1P78426 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NKX6-1P78426 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX6-1P78426 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.23■□□□□ 0.19
NKX6-1P78426 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NKX6-1P78426 STARP1-201ENST00000397973 869 ntBASIC16.23■□□□□ 0.19
NKX6-1P78426 AL023284.2-201ENST00000405850 579 ntBASIC16.23■□□□□ 0.19
NKX6-1P78426 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.23■□□□□ 0.19
NKX6-1P78426 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.23■□□□□ 0.19
NKX6-1P78426 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.23■□□□□ 0.19
NKX6-1P78426 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
NKX6-1P78426 AC083849.1-201ENST00000615227 514 ntBASIC16.23■□□□□ 0.19
NKX6-1P78426 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 LTB4R2-202ENST00000528054 3092 ntBASIC16.23■□□□□ 0.19
NKX6-1P78426 GPAT2P1-201ENST00000444924 1672 ntBASIC16.23■□□□□ 0.19
NKX6-1P78426 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
NKX6-1P78426 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms